Gene Information

Name : UMNK88_pK8844 (UMNK88_pK8844)
Accession : YP_006131705.1
Strain :
Genome accession: NC_017639
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 39894 - 40775 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence :
ATGGATAGCGCATGTGCCCTTGTTACCTTCGGACAAGGAATAGCCCCGGTAAGCCGTGTTCTGGGCGTGTCACGTGCGCA
GTTAACATTACGGATGAAGGCATCTGATAACAAGCCAGATAAACGGCGTCAGAGGCGCGATGAGACTGCGGATGCAGAAG
TCTTATCGCGCATCCTGGATATCATTGGCGATATGCCTGCATACGGGTATCGCCGTGTCTGGGCGATACTCAGGCGGCAG
TCCCGAAATGAAGGACTACCGTTCGTGAATGCAAAGCGTGTTTACCGGATAATGAGCGAAAATAGTCTGTTGTTGTTACA
TGACAAACCATCACGACGGCAGCGGGAACATAAAGGCCGAATATCGGTGAAGGAAAGCGACCAGCGTTGGTGTTCCGATG
GCTTTGAGTTCGGTTGCGATGATGGCGAAAAACTGCGTGTTACGTTCGTCCTGGACTGTTGCGATCGTGAAGCCATAGAC
TGGGCCGCAAGCACGGGAGGTTACGATAAAGCGACAGTGCAGGATGTGATGTTAGGAGCGATAGAAAAACGCTTTGGCGA
TAAAGTACCGGAACAGTCGATCCAGTGGCTGACAGATAACGGTTCAGCGTACAGAGCGCATGAAACACGGCAGTTCGCCA
GAGAGCTGAATCTGGAGCCCTGCACAACGGCAATCAGTAGTCCTCAGAGTAATGGAATGGCAGAACGGTTCGTGAAAACG
ATAAAGGAAGACTACATCGCGTTCATGCCGAAACCGAATGTAAGAACGGCATTGCATAACCTTGCAGTGGCGATCGAGCA
TTACAATGAAAACCATCCGCATAGTGCGTTGGGTTATCGCTCTCCGCGAGAATATCGACGTCAGCGGGTAATGTTAACTT
AA

Protein sequence :
MDSACALVTFGQGIAPVSRVLGVSRAQLTLRMKASDNKPDKRRQRRDETADAEVLSRILDIIGDMPAYGYRRVWAILRRQ
SRNEGLPFVNAKRVYRIMSENSLLLLHDKPSRRQREHKGRISVKESDQRWCSDGFEFGCDDGEKLRVTFVLDCCDREAID
WAASTGGYDKATVQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNGMAERFVKT
IKEDYIAFMPKPNVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVMLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 3e-104 96
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-104 96
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 4e-93 95
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 3e-124 90
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 9e-80 66
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 7e-80 66
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 4e-80 66
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 8e-80 65
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 4e-86 64
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 8e-78 64
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 2e-84 63
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 3e-86 63
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-85 63
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 5e-86 63
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 5e-86 63
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 5e-86 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_pK8844 YP_006131705.1 putative transposase VFG0649 Protein 3e-80 65
UMNK88_pK8844 YP_006131705.1 putative transposase VFG1732 Protein 2e-86 64
UMNK88_pK8844 YP_006131705.1 putative transposase VFG0621 Protein 2e-86 63
UMNK88_pK8844 YP_006131705.1 putative transposase VFG0608 Protein 2e-86 63