Gene Information

Name : UMNK88_pK8833 (UMNK88_pK8833)
Accession : YP_006131694.1
Strain :
Genome accession: NC_017639
Putative virulence/resistance : Unknown
Product : truncated transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 30106 - 31236 bp
Length : 1131 bp
Strand : +
Note : -

DNA sequence : 
GTGAGCAGCGCCCTGAAAGTGATCCGCACAGAACGGGTAAAAAAAGCCTGTACAAAATGTGACTGCATCGTTGAAGCACC
GGCACCGTCCCGTCCGATAGCGCGTGGTGTCGCGGGCCCGGGGTTACTTGCCCGCGTGTTAACGGGAAAATACTGCGAAC
ACCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGTCAGGGTGTCGAACTGAGCCGTGCGTTACTCTCCAACTGGGTT
GACGCGTGCTGCCAGTTAATGACGCCGCTGAATGATGCCCTGTACCGTTACGTGATGAACACCCGCAAGGTTCACACTGA
TGACACACCAGTAAAAGTGCTGGCACCGGGCAGGAAGAAGGCGAAAACAGGATATATCTGGACGTATGTCCGGGATGACA
GGAATGCCGGTTCGCCAGAGCCTCCGGCGGTCTGGTTCGCCTACTCACCGGATCATCAGGGGAAACATCCGGAGCAGCAC
TTTCGTCCCTTCCGGGGTATCCTGCAGGCAGATGCGTTTAATGGTTACGATCGGCTGTTCAGTGCCGGACGTGAAGGCGG
CGCGTTGACGGAAGCAGGATGCTGGGCTCATGCGCGACGCAAAATCCACGATGTATATATCAGTACCAAAAGCGCGACAG
CGGAAGAAGCCCTGAAACTAATCGGTGAACTGTACGCCATCGAGCACGATATACGCGGGTTACCGGTGTCTGAACACCTG
GCGGTCAGGCAAATGCAGAGTAGACCGCTCCTGACTTCCCTGTATAAGCTGATGCAGGAGAAAGAACACACGTTATCGAA
GAAATGTCGTCTGGGAGATGCGTTCCGGTATATCCGGAAGCACTGGGCTGCGTTGTGCAACTTCTGTGATGATGGCCTGG
CTGAGGTAGATAATAATGCCGCAGAAAGAGCGCTTCGTGCAGTCTGTCTCGGGAAGAAAAATTATGTGTTCTTCGACAGC
GATCACGGTGGCGAGCGTGGAGCACTGTTGTACGGGCTGATCGGCACCTGCCGACTGAACGGTATAGATCCGGAAGCGTA
TCTGCGCCATATCCTGGGTGTACTGCCGGAATGGCCTTCCAACCGTGTTGACGAGCTCCTGCCATGGAACGTAGCACTCA
CCAATAAATAA

Protein sequence : 
MSSALKVIRTERVKKACTKCDCIVEAPAPSRPIARGVAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWV
DACCQLMTPLNDALYRYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQH
FRPFRGILQADAFNGYDRLFSAGREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHDIRGLPVSEHL
AVRQMQSRPLLTSLYKLMQEKEHTLSKKCRLGDAFRYIRKHWAALCNFCDDGLAEVDNNAAERALRAVCLGKKNYVFFDS
DHGGERGALLYGLIGTCRLNGIDPEAYLRHILGVLPEWPSNRVDELLPWNVALTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-155 87
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-119 65
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-118 64
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 8e-120 64
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 8e-119 64
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 6e-119 64
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 6e-119 64
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 6e-119 64
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-119 64
tnp AEA34686.1 transposase Not tested Not named Protein 2e-119 64
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-119 64
unnamed AAC31494.1 L0015 Not tested LEE Protein 8e-120 64
unnamed AAL57570.1 unknown Not tested LEE Protein 5e-120 64
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-119 64
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 2e-83 56
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 6e-81 55
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-96 55
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-73 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-91 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_pK8833 YP_006131694.1 truncated transposase VFG1700 Protein 2e-119 65
UMNK88_pK8833 YP_006131694.1 truncated transposase VFG0793 Protein 5e-120 64
UMNK88_pK8833 YP_006131694.1 truncated transposase VFG0634 Protein 2e-81 55
UMNK88_pK8833 YP_006131694.1 truncated transposase VFG1513 Protein 7e-74 54