|
Name : ybdN (ECDH1ME8569_0573) Accession : YP_006127974.1 Strain : Escherichia coli DH1 Genome accession: NC_017638 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 625609 - 626829 bp Length : 1221 bp Strand : - Note : - DNA sequence : ATGTCTATTTATAAAATTCCTCTTCCGCTCAATATTCTGGAAGCTGCACGAGAGCGTATTACCTGGACACTCAACACCCT ACCCCGCGTTTGTGTCTCATTTTCTGGCGGCAAAGACTCTGGTTTAATGCTGCATCTGACAGCCGAACTTGCCCGACAAA TGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAGGCGCAATTCTCTTGCACCATTAACTATGTTCAGTCCCTGCGC GAGTTGTACACCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCACAATACCA ACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTACGTCAACCTCCCCAAGATGCGATAACCGACCCTGACTTTT TCTGCTTTTACCAGCCAGGCATGACCTTCGAACAATTTGTACGTGAGTTTGCCGAATGGTTTTCACAAAAACGTCCGGCG GCGATGATGATCGGCATCCGTGCGGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGC CGACGATAAACCCTGGACTACGGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATTTACGACTGGAAAGTGGCTG ATATCTGGACCTGGTATGCAAATCATCAAAGTCTCTGCAACCCACTGTATAACCTAATGTATCAGGCAGGCGTTCCTCTG CGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGACAAGGATTATGGCTCTATCACGTTATCGAACCGGATCG CTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGACAATCATTTCTATGGGC ATCGGAAAATCCTCAAGCCAGAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAAAAACA GCTGAGCATTACCGCAATAAAATCGCCATTTATTTGCACTGGTATCAGAAAAAAGGCATCGAGGTTCCACAAACCCAGCA AGGGGACATTGGCGCGAAAGATATCCCCTCCTGGCGGCGGATATGCAAAGTTTTACTCAATAACGATTACTGGTGTCGGG CATTATCATTTAGCCCCACAAAATCGAAGAACTATCAGCGTTATAACGAACGGATAAAAGGAAAACGTCAGGAATGGGGG ATACTATGCAACAACGATTAA Protein sequence : MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLR ELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPL RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKT AEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKSKNYQRYNERIKGKRQEWG ILCNND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3502 | YP_854308.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 4e-125 | 59 |
| c5209 | NP_757057.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 4e-125 | 59 |
| ibrA | ADD91735.1 | putative phosphoadenosine phosphosulfate reductase IbrA | Not tested | PAI-I AL862 | Protein | 9e-124 | 59 |
| Z1643 | AAQ19139.1 | putative phosphoadenosine phosphosulfate reductase | Not tested | PAI I CL3 | Protein | 3e-124 | 59 |
| z1203 | CAD33763.1 | Z1203 protein | Not tested | PAI I 536 | Protein | 5e-125 | 59 |
| Z1203 | NP_286738.1 | hypothetical protein | Not tested | TAI | Protein | 7e-124 | 59 |
| ORF_31 | AAZ04441.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 3e-125 | 59 |
| Z1643 | NP_287146.1 | hypothetical protein | Not tested | TAI | Protein | 7e-124 | 59 |
| t4277 | NP_807875.1 | hypothetical protein | Not tested | SPI-7 | Protein | 6e-125 | 58 |
| STY4583 | NP_458667.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 1e-124 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ybdN | YP_006127974.1 | hypothetical protein | VFG1504 | Protein | 3e-125 | 59 |
