Gene Information

Name : yghE (ECDH1ME8569_2868)
Accession : YP_006130269.1
Strain : Escherichia coli DH1
Genome accession: NC_017638
Putative virulence/resistance : Virulence
Product : GspL-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3089035 - 3089928 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence : 
TTGAATATCGACCAGCAACTGGCAACCGTAGCAGTGATTCACCAACAGCATATGCGCAACATTGCGCAGTGGTTGCAGGA
AAACGGCATCACCCGCGCTACCGTCGCGCCGGACTGGATGTCCATTCCTTGTGGGTTTATGGCTTGCGATGCGCAACGGG
TTATCTGCCGCATCGATGAATGCCGGGGATGGAGCGCCGGGCTGGCGCTGGCTCCGGTCATGTTCCGCGCCCAGCTCAAT
GAGCAGGATTTACCGCTTTCGCTAACCGTAGTCGGCATTGCACCGGAAAAGCTATCAGCATGGGCTGGCGCAGACGCTGA
ACGCCTGACCGTTACAGCTCTGCCCGCCATTACCACTTATGGCGAACCGGAAGGGAACCTGCTGACAGGGCCGTGGCAGC
CTCGCGTCAGCTACCGAAAACAGTGGGCGCGCTGGCGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGCA
GTGGAGCGGGGCGTGACGTTATGGAGCGTCAGCGAACAGGTGGCGCAAAGCCGCACCCAGGCGGAGGAACAGTTCTTAAC
GTTGTTCCCGGAGCAGAAGCGGATTGTGAATTTACGCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCG
ACGATACCCGGCTGCTCGCCGAGTTGTCAGCGATAGCCAGCACCCTGAAATCAGCGTCACTTTCCGACATCGAAATGCGT
GGTTTTACCTTTGATCAAAAACGCCAGATACTTCACCTCCAGCTACGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCG
TAGTGTACTGGCAACCGATTATGTTGTGCAACAGGACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGT
TGCGGAGGAAATAA

Protein sequence : 
MNIDQQLATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLN
EQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALA
VERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMR
GFTFDQKRQILHLQLRAANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 6e-118 96
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 4e-122 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yghE YP_006130269.1 GspL-like protein VFG2055 Protein 2e-117 97