Gene Information

Name : pilR (ECW_P1m0055)
Accession : YP_006127341.1
Strain :
Genome accession: NC_017637
Putative virulence/resistance : Virulence
Product : Type IVB thin prepilin integral membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 51440 - 52525 bp
Length : 1086 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTGAAATGAATTTCAGTCAACGGCTGAGACGTTTCATTGTCAGAAAAACGTTCAGCGCCCCCTACAGGGTGCAGTT
TTACGAAGCTCTGCGTTTTCTGCTGGAAAATAAACAGCCATTAAAGACCGCACTGGAACAGATGCGGGATGCCTGGACAG
ACTTTGGACGAAAATGGCATCCCTTTGCTGAACTGGCCACAGACTGTATTGAGTCTCTTCGTGAAAACAGTGGCGAAAAC
TCTCTGGAATATACTCTTGGTTTATGGGTTCCCCAGGAAGAGGCTGCAGTAATCAGTGCCGGAATAAGAAGTGGTTCCAT
TGTGGATGCATTACAATTTGCCACCACACTTACAGATGCCAAAAAGCAACTCCATCAGGCCATATGGCAAATGGCTATTT
ACCCGGTGGGGTTGTTAATCATGATGACGGGGACATTATATGTTCTTAATACAGAGCTAATACCTGTACTGAGCAAAATA
AGCTCCCCTGATTCATGGAGTGGTGCTCTTGGTTTTCTCTATGGATTATCTGTGTTTGTCGATAATTACGGCGCTATATG
TGCCGTTCTTTTTGCAGTGGTCACAGGTGTAATATCATGGTCTCTGAAAAACTGGAAAAGCCGCTCTTTGGCTGACAATA
TAATGCCATGGAGTATTTATAAGGATATACAGGGGGCAGCATTCCTCCTGAATATGGCTGCACTTCTGAAAGCCAAAATG
ACAACGCTCAACTCACTGAACGTTCTTCAGGACTTTGCATCACCATGGTTAAGCACACGCCTTGACAGCATTATTTACCG
CGTACGCCAGGGGGATCACCTTGGGCTGGCTTTGCGTCAGTGCGGTTATCAGTTCCCATCCAGGGAAGCAGCCAACTTCC
TGTCTTTATTACAGGGAGATGGCGCAACGGAGCTAATCGGCAATTATGGCCAACGGTGGCTTGTACAAACGCTGGAGCGA
GTAAAAAAACGAGCAGCTGTTGTGCGTTTAATTATGCTGATATTTCTTGTCATGTCACTCCTGTTACTGGTCATGGCCGT
TGTAGACATTCAGTCTATTGGCGACAACAGTATGGGTAATCTTTAA

Protein sequence : 
MREMNFSQRLRRFIVRKTFSAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGEN
SLEYTLGLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKKQLHQAIWQMAIYPVGLLIMMTGTLYVLNTELIPVLSKI
SSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVVTGVISWSLKNWKSRSLADNIMPWSIYKDIQGAAFLLNMAALLKAKM
TTLNSLNVLQDFASPWLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELIGNYGQRWLVQTLER
VKKRAAVVRLIMLIFLVMSLLLLVMAVVDIQSIGDNSMGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3501 YP_001007662.1 type IV pilus integral membrane protein Virulence YAPI Protein 3e-77 53
pilR YP_001402684.1 type IV pilus biogenesis protein PilR Virulence YAPI Protein 4e-69 51
pilR CAF28491.1 putative integral inner membrane protein Virulence YAPI Protein 4e-69 50
pilR NP_458634.1 putative membrane protein Virulence SPI-7 Protein 2e-61 47
pilR NP_807845.1 hypothetical protein Virulence SPI-7 Protein 2e-61 47
pilR AAC98886.2 PilR Virulence SPI-7 Protein 2e-61 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_006127341.1 Type IVB thin prepilin integral membrane protein VFG2314 Protein 1e-77 53