Gene Information

Name : ECW_m4649 (ECW_m4649)
Accession : YP_006127163.1
Strain : Escherichia coli W
Genome accession: NC_017635
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4774891 - 4775724 bp
Length : 834 bp
Strand : +
Note : -

DNA sequence :
ATGCAAACAGAAGCTGAAGTCTTAACCGATCATAACGAACTAATTTGCTCGACCAGTATTGAGCGCATCGTCACAGGACG
TGATAGTGCACTGAACCAGATAGCGACGTTAATCCAAAAACTTCATGATATCTCCAGCCTGACATCCAGTATTGGCGGTG
ATGTGGCTGGAACCTGGGCAATGCGGAATGGATATGCCTTTGACTGCTGGCTGATGCAGCCAACCGACAAAGCGATGCCG
GTGATCACCCGCAATATCGACCGCAGCATCTGGCGCGATCTCATGCTGAAGTCCGGGATGTTGACTCTGATGGATGCCGA
AGCTCGCAGTCAGTGGGCAAAGAACCTGGAGGAGGGCGATCTCCCGGCGATTAGCGAAGCCAACATCCTGAGTACCTTTG
AACAACTTCACCACAATAAGCAGGATGTTTTCGAACGTGGGATTATCAATGTATTTAAGGGATTGAGCTGGGACTACAAA
ACCAATAATCCCTGTTATTTCGGTAAGAAGATTATCGTTAACAATCTGGTGAAGCATGACAGATGGGGCTACAGCCTGAA
CTGGGGCTGGCGGCGAGATCAGCTTGCCGATCTGGAGCGTATGCTCTATTTGCTGGATGGGAAGGCCATTCCCGATAACC
GGCATGATATCTCCATCCGGTTTATGGATTTTGTGCGCGATAATCCGCATCAGCAGATTTTTGAAGATGAGTTATTCACT
ATTCGCTACTTTCAGAAAGGCAGTGGGCATATCACTTTCAAGCGACTGGATCTGGTGGATAAGATGAATGATATCGTGGC
GAAGCACTTTCCGTCAGCGTTATCAGCAAAATGA

Protein sequence :
MQTEAEVLTDHNELICSTSIERIVTGRDSALNQIATLIQKLHDISSLTSSIGGDVAGTWAMRNGYAFDCWLMQPTDKAMP
VITRNIDRSIWRDLMLKSGMLTLMDAEARSQWAKNLEEGDLPAISEANILSTFEQLHHNKQDVFERGIINVFKGLSWDYK
TNNPCYFGKKIIVNNLVKHDRWGYSLNWGWRRDQLADLERMLYLLDGKAIPDNRHDISIRFMDFVRDNPHQQIFEDELFT
IRYFQKGSGHITFKRLDLVDKMNDIVAKHFPSALSAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-81 60
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 3e-79 59
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 2e-79 59
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 3e-79 59
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-79 59
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 3e-80 59
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 1e-79 59
unnamed AAL57572.1 unknown Not tested LEE Protein 1e-79 59
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-80 59
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-80 59
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 1e-79 59
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-79 58
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-79 58
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-79 58
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 1e-69 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECW_m4649 YP_006127163.1 hypothetical protein VFG0666 Protein 1e-79 59
ECW_m4649 YP_006127163.1 hypothetical protein VFG1533 Protein 8e-80 59
ECW_m4649 YP_006127163.1 hypothetical protein VFG1685 Protein 8e-70 55