Gene Information

Name : yfjQ (ECW_m3949)
Accession : YP_006126529.1
Strain : Escherichia coli W
Genome accession: NC_017635
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4056002 - 4056823 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence :
ATGACCCGTTTAGCCAGCCGCTTTGGTGCGGTGAATCTCGTTCGCCGTGACCGTCCGTTAACCCGCGACGAACTGGCGCA
TTATGTGCCGAGTGTGTTTAGCGAAGAAAAGCATGAATCCCGCAGTGACAGGTACACCTATATCCCGACTATTTCCCTGC
TCGATAACCTACAGCGTGAAGGCTTCCAGCCATTCTTTGCCTGCCAGACTCGAGTTCGAGATCAGAGCAAACGTGAGCAT
ACGAAGCACATGCTGCGCCTGCGTCGTGAAGGTCAGATTACTGGCAAACAGGTTCCGGAAATAATTCTGCTTAACAGCCA
TGACGGCTCCAGTTCATATCAGATGCTACCGGGGTTATTCAGAGCAGTTTGCCAAAATGGGCTGATTTGCGGTGAGTCTT
TCGGGGAGGTGCGAGTACCGCATAAAGGCAACGTAGTAGAGAAAGTCATCGAAGGGGCCTACGAAGTACTGGGAATATTT
GACCACGTAGAAGAGAAACGCGATGCCATGCAGTCGCTTTTGTTGCCGCCACCTGCTCAGCAGGCGATGGCGAAAGCGGC
GCTGACATATCGCTTCGGTGAGGAGCATCAACCGGTGACAGAGACGCAGATACTTTCCCCACGCCGCTGGCAGGATGAGA
GTAATGACCTGTGGACTACTTATCAGCGCATTCAGGAAAACCTGATTAAAGGCGGACTATCGGGGAGAACAACCAAAGGA
AAGCGCGCCCATACCCGAGCAGTGAAAGGTATTGACGGTGATGTGAAGCTCAACCGTGCCCTCTGGGTGATGGCTGAGAA
TATGCTGCAGCTTGCTTCATGA

Protein sequence :
MTRLASRFGAVNLVRRDRPLTRDELAHYVPSVFSEEKHESRSDRYTYIPTISLLDNLQREGFQPFFACQTRVRDQSKREH
TKHMLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLFRAVCQNGLICGESFGEVRVPHKGNVVEKVIEGAYEVLGIF
DHVEEKRDAMQSLLLPPPAQQAMAKAALTYRFGEEHQPVTETQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTTKG
KRAHTRAVKGIDGDVKLNRALWVMAENMLQLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-95 75
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-93 74
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-94 74
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-93 74
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-95 74
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-91 73
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 4e-91 73
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-92 73
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 4e-91 73
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-92 73
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-92 73
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-92 73
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-90 73
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-90 73
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 2e-89 71
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 6e-74 56
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 5e-74 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfjQ YP_006126529.1 hypothetical protein VFG1526 Protein 2e-95 75
yfjQ YP_006126529.1 hypothetical protein VFG1615 Protein 1e-94 74
yfjQ YP_006126529.1 hypothetical protein VFG0658 Protein 2e-91 73
yfjQ YP_006126529.1 hypothetical protein VFG1676 Protein 9e-90 71