Gene Information

Name : lpfB1 (ECW_m3817)
Accession : YP_006126399.1
Strain : Escherichia coli W
Genome accession: NC_017635
Putative virulence/resistance : Virulence
Product : putative fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3911679 - 3912365 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACGTATTAGCTTTGCTGTGCTGGCACTTTTAATGACCGCACAACAGTGTTTTGCTGGTGGCGTAGCCTTAAGCAC
GACGCGTGTTATTTATGATGGCGGCAAGAAAGAAGCGTCGCTGACCGTTGAAAACCATAATAAAAATGAAGAGTTTTTGA
TCCAGTCATGGATTGATGATGTGAATGGCAATAAAAAAACACCGTTTATTATTACACCGCCATTATTCAAACTTGATCCT
GATAAAAATAACGTCTTACGTATCGTCAATATTGAAGATACCTTACCTAAAGATCGTGAATCCGTTTACTGGATTAATGT
AAAGGCCATTCCTGCGAAAAGTGCTGAAAATGAAAATAAAAACGTCTTACAGATAGCCGTTCGCACCCGTTTGAAGTTGT
TCTATCGTCCAAAAGGTTTGCCGGGAAGCAACCTCGAGGCCATGAAACAGTTACGTTTCCAGCGTCAAAATAACCAAATT
GTGGTTAATAACGACTCCGCTTATAACCTGACCTTTAATCAGTTTTCCATTAATGGACAAAAGATTGAACGGGCGGGAAT
GGTTCTCGCGAAAGGAAAGTTAAACATTAACCTTCCAGCCGGTACAGGCAACGCGCACGAAGTGAAATACAGCATTATTA
ATGATTTCGGTGTTGCTGGCGAAATGCTGACGAAGCCGATTAACTGA

Protein sequence : 
MKRISFAVLALLMTAQQCFAGGVALSTTRVIYDGGKKEASLTVENHNKNEEFLIQSWIDDVNGNKKTPFIITPPLFKLDP
DKNNVLRIVNIEDTLPKDRESVYWINVKAIPAKSAENENKNVLQIAVRTRLKLFYRPKGLPGSNLEAMKQLRFQRQNNQI
VVNNDSAYNLTFNQFSINGQKIERAGMVLAKGKLNINLPAGTGNAHEVKYSIINDFGVAGEMLTKPIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpfB1 YP_006126399.1 putative fimbrial chaperone protein VFG0455 Protein 4e-74 70
lpfB1 YP_006126399.1 putative fimbrial chaperone protein VFG0445 Protein 3e-42 42
lpfB1 YP_006126399.1 putative fimbrial chaperone protein VFG1644 Protein 2e-39 41
lpfB1 YP_006126399.1 putative fimbrial chaperone protein VFG0911 Protein 2e-39 41