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Name : yghJ (ECW_m3239) Accession : YP_006125855.1 Strain : Escherichia coli W Genome accession: NC_017635 Putative virulence/resistance : Virulence Product : accessory colonization factor Function : - COG functional category : - COG ID : - EC number : - Position : 3323653 - 3328215 bp Length : 4563 bp Strand : - Note : - DNA sequence : ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGTGCAACCCTGTTAGCCGGTTGTGATGGCGG TGGCTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC CAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAACCTACGCCGGAACCGACACCTGATCCTGAGCCAACACCA GAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACTCTGGGCGGAAGCCTGCGGGTAACTGGTGATATCAC CTGTAATGATGAATCCAGCGATGGCTTTACCTTTACACCAGGCGACAAAGTCACCTGTGTGGCAGGGAACAACACGACAA TTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGTCTTGAGGACGCG CAAGAACTGGCGGGTTCCGACAACAAGAAAAGCAATGCGCTCTCGCTGGTCACCTCCATGAACAGTTGCCCGGCGAATAC AGAACAGGTGTGCCTGGAGTTCTCCTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATCGATCTGGCAC CGGAAGAATTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCGCCATCCACTCATACTTCA CCGGTCGTGCCCGCCACCACTCCGGGAACAAAACCGGATCTAAACGCTTCCTTCGTGTCGGCTAACGCGGAACAGTTTTA TCAGTATCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGTCGATAGTCAGGGGGATGGTGTTGTTGGTGTCAACT ATTACACCAATTCCGGCCGTGGTGTAACCGGAGAAAACGGGGAATTTTCCTTTAGTTGGGGGGAAACCATCTCCTTTGGC ATCGACACTTTTGAGCTTGGTTCTGTGCGTGGTAACAAGTCGACTATTGCATTGACTGAACTGGGTGATGAAGTTCGCGG GGCAAATATCGATCAGTTGATTCACCGCTATTCGAAGGCTGGACAAAATCACACGCGTGTAGTTCCGGATGAAGTGCGCA AGGTTTTTGCTGAATATCCCAACGTGATTAACGAGATTATCAATCTCTCGTTATCCAATGGTGCGACGCTGGGGGAAGGT GAGCAAGTCGTTAATCTGCCTAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCAAAGAGATCGATACCGCGATTTG TGCGAAAACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACAACGCGCAATGTTAATGACGGCCAGATTCAGGGCG TTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGTAAGTTCCATGTATTCCATGACTCTACCAACTTC TATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAA TGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAATGAGCTGGCGTACATTACTGAAGCGCCTT CCATTGTGCGACCAGAGAACGTGACACGCGAAACCGCCACCTTCAACCTGCCGTTTATCTCGCTGGGGCAAGTGGGCGAT GGCAAGCTGATGGTTATCGGTAACCCACACTACAACAGCATCCTGCGTTGCCCGAACGGCTACAGCTGGAACGGGGGCGT TAATAAAGACGGACAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGCTGCGCTATCTGT CAAATGATCGCTGGTTGCCGGATGCAAAATCCAGTATGACCGTGGGTACTAACCTGGACACGGTATATTTCAAAAAACAT GGTCAGGTGCTGGGAAATAGCGCACCGTTTGCGTTCCACAAGGATTTCACTGGCATCACGGTCAAACCAATGACCAGCTA TGGCAATCTGAATCCAGATGAAGTTCCTCTGTTGATCCTCAATGGCTTTGAATACGTCACACAATGGGGTAGCGATCCTT ACTCCATTCCTCTGCGCGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGACCGATTTGATCGCCTATATGAAC AAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCATCTGGCTTTGTACGTCTGCT TGATGCCGCAGGTTTGTCGATGGCGCTTAACAAGTCGGTAGTAAATAACGATCCGCAAGGCTACCCTGACCGTGTTCGTC AACGACGTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTGTCGATGGTAAACCACCGTATACCATTGATGACACC ACGAAAGAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTGGCAGGA AGAAGTTGAGGGTAAACAGGTAACCCAATTCGCCTTTATTGATGAAGCCGACCACAAAACGCCTGAGTCACTGGCTGCGG CAAAACAGAGAATTCTGGACGCGTTCCCAGGGCTGGAAGTGTGTAAGGATTCTGACTATCACTATGAGGTCAACTGTCTG GAATACCGCCCAGGCACGGGTGTGCCGGTAACCGGTGGCATGTATGTTCCGCAGTATACGCAGCTGGATCTTGGAGCTGA CACTGCGAAAGCGATGCTGCAGGCTGCGGATTTAGGCACCAATATTCAGCGCCTGTATCAGCATGAGCTTTATTTCCGTA CCAATGGCCGCCAGGGTGAGCGTCTCAACAGCGTCGATCTGGAACGTTTATACCAAAACATGTCCGTCTGGCTGTGGAAC GAGACGAAATATCGTTATGAAGAGGGTAAAGAAGACGAGCTGGGCTTTAAAACGTTCACTGAGTTTCTGAACTGCTACAC CAACAATGCATACGTTGGCACGCAGTGTTCCGCTGAGCTGAAAAAATCGCTGATCGATAACAAGATGATTTACGGTGAAG AAAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGCCTGATGCTGGGC CGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTTGAGAAGTATCCGGGAGCAGTATCGGAAGAGGGACAGAACGTTAC TGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGTGGGCACCGGCTC AGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGTGGCGCTGGCTGACGACCTGACCGGAAGA GAGAAGCATGAAGTCGCGCTGAACCGTCCGCCAAGAGTAACCAAAACGTACTCTCTGGACGCTAGTGGTACGGTGAAATT CAAGGTGCCTTACGGTGGTCTGATTTATATCAAAGGCGACAGCAAAGACAATGAATCTGCCAGCTTCACCTTTACTGGTG TGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTCACCGGCTCCGCTGGGTGAGCTGGAATCA GACGCTTTCGTTTATACCGCACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACTGAAGCAATTCGCTAACGA TCTGGATACCTTTGCCAGCTCGATGAATGATTTCTACGGTCGTAATGAGGAAGACGGTAAGCACCGGATGTTTACCTATA AAAACTTGACGGGCCACAAGCATCGTTTCGCCAACGATGTGCAGATCTCCATCGGTGATGCGCATTCGGGTTATCCGGTA ATGAACAGCAGCTTCTCGACGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCACGAAGTAGG GCACAACGCCGCAGAAACGCCGCTGACTGTTCCAGGCGCGACCGAAGTGGCGAACAACGTGCTGGCGCTGTACATGCAGG ATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAGAGCAACGGTCAG GCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCGCAGCTGAAGGAATGGGCAGAGAAAAACTTTGATAT CAAGAAATGGTATCCAGAAGGTGAATTGCCGAAGTTCTTCAGCGATCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGT TGATGCACCGTAAAGCGCGCGGCGATGACGTTGGTGACAAGACCTTTGGTGGCAAGAATTACTGTGCTGAATCCAACGGT AACGCTGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAATCC GGGTGCGAATGCTTACCAGCTGCCGGGGGCGAGCGAGATGAGCTTCGAGGGCGGTGTGAGCCAGTCGGCGTACAACACGC TGGCGTCACTCAAGCTGCCGAAACCGGAACAGGGACCGGAAACCATTAACAAGGTTACCGAGCATAAGATGTCTGTCGAG TAA Protein sequence : MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPTPDPEPTP EPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDA QELAGSDNKKSNALSLVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS PVVPATTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGDGVVGVNYYTNSGRGVTGENGEFSFSWGETISFG IDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSKAGQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEG EQVVNLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQVGD GKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLDTVYFKKH GQVLGNSAPFAFHKDFTGITVKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTDLIAYMN KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYTIDDT TKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKQRILDAFPGLEVCKDSDYHYEVNCL EYRPGTGVPVTGGMYVPQYTQLDLGADTAKAMLQAADLGTNIQRLYQHELYFRTNGRQGERLNSVDLERLYQNMSVWLWN ETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKAGMMNPSYPLNYMEKPLTRLMLG RSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGR EKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGDSKDNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELES DAFVYTAPKKNLNASNYTGGLKQFANDLDTFASSMNDFYGRNEEDGKHRMFTYKNLTGHKHRFANDVQISIGDAHSGYPV MNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQ AWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPEGELPKFFSDREGMKGWNLFQLMHRKARGDDVGDKTFGGKNYCAESNG NAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLPKPEQGPETINKVTEHKMSVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 88 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_006125855.1 | accessory colonization factor | VFG0106 | Protein | 0.0 | 49 |
