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Name : gspD (ECW_m3235) Accession : YP_006125851.1 Strain : Escherichia coli W Genome accession: NC_017635 Putative virulence/resistance : Virulence Product : type II secretion system lipoprotein D Function : - COG functional category : - COG ID : - EC number : - Position : 3319153 - 3321213 bp Length : 2061 bp Strand : - Note : - DNA sequence : GTGTTTTGGCGTGATATTACGTTGTCGGTCTGGCGTAAGAAGACAACTGGCCTCAAAACAAAAAAGCGTTTACTGCCGCT GGTGCTGGCAGCGGCATTATGCAGTTCACCGGTCTGGGCGGAAGAAGCCACTTTCACCGCTAATTTTAAAGATACCGACC TGAAATCGTTCATCGAAACCGTCGGCGCTAACCTTAATAAAACCATCATTATGGGGCCGGGCGTACAGGGGAAAGTGAGT ATTCGCACCATGACCCCGCTCAATGAACGCCAGTATTACCAGCTATTCCTTAACCTGCTGGAAGCACAGGGGTATGCCGT CGTACCGATGGAAAACGACGTGCTGAAGGTGGTGAAATCCAGCGCTGCGAAAGTCGAGCCGCTGCCGCTGGTCGGTGAAG GCAGCGACAACTACGCGGGCGATGAAATGGTCACCAAAGTAGTGCCGGTACGTAATGTGTCGGTACGCGAGTTGGCACCG ATTCTGCGCCAGATGATCGACAGCGCAGGCTCAGGCAACGTTGTTAATTACGATCCCTCCAACGTGATTATGCTCACCGG ACGCGCCTCCGTTGTGGAGCGCCTGACAGAAGTGATCCAGCGCGTGGATCACGCGGGTAATCGCACCGAAGAGGTGATCC CGCTGGATAACGCCTCGGCTTCGGAAATCGCCCGCGTGCTGGAAAGCCTGACGAAAAACAGCGGCGAGAACCAGCCAGCG ACGCTGAAATCTCAAATTGTCGCCGACGAACGCACCAACAGTGTGATTGTCAGTGGTGACCCGGCCACGCGGGACAAAAT GCGCCGCCTGATCCGTCGGCTGGACTCAGAAATGGAACGCAGCGGCAACAGCCAGGTTTTCTATCTCAAATACAGCAAAG CCGAAGATCTGGTCGATGTGCTGAAGCAGGTCAGCGGCACGCTCACGGCGGCTAAAGAAGAGGCGGAAGGCACGGTCGGT AGCGGGCGTGAGATTGTATCCATCGCCGCCAGCAAACACAGTAATGCCCTGATTGTAACCGCACCGCAGGACATCATGCA GTCGCTGCAAAGCGTGATTGAACAACTGGATATTCGCCGTGCTCAGGTGCACGTCGAGGCGTTGATCGTGGAAGTTGCCG AAGGTAGCAATATCAACTTCGGCGTGCAGTGGGCGTCGAAAGATGCCGGATTAATGCAGTTTGCTAATGGTACGCAGATC CCTATCGGTACGCTGGGGGCAGCCATTTCTCAGGCGAAACCGCAGAAAGGCTCGACGGTGATCAGTGAAAACGGCGCTAC CACCATTAATCCGGATACCAACGGCGATCTCTCCACGCTCGCCCAGCTTCTTTCCGGCTTTAGCGGTACGGCGGTTGGTG TGGTGAAAGGCGACTGGATGGCGCTGGTGCAGGCGGTTAAAAACGACTCCAGCTCGAACGTGCTCTCCACGCCGAGCATC ACCACGCTGGACAACCAGGAAGCCTTCTTCATGGTGGGCCAGGACGTTCCGGTATTAACCGGCTCTACCGTTGGCTCCAA TAACAGCAATCCTTTCAATACAGTAGAAAGGAAAAAAGTCGGCATCATGCTGAAAGTCACGCCGCAGATTAACGAAGGTA ACGCGGTACAGATGGTGATTGAGCAGGAAGTCTCGAAGGTGGAAGGACAGACCAGCCTCGACGTGGTGTTTGGTGAGCGC AAACTGAAAACCACCGTGCTGGCTAACGATGGTGAGCTGATTGTGCTTGGTGGTCTGATGGACGATCAGGCGGGAGAAAG CGTGGCGAAAGTGCCGCTGCTGGGCGATATCCCATTGATTGGTAACCTGTTTAAATCGACGGCGGATAAAAAAGAAAAAC GTAACCTGATGGTGTTTATCCGCCCGACCATTCTGCGTGACGGTATGGCGGCAGACGGCGTGTCGCAGCGCAAATATAAC TACATGCGCGCCGAGCAGATCTATCGCGATGAGCAAGGTTTAAGCCTGATGCCGCACACCGCGCAGCCGGTACTGCCAGC GCAAAATCAGGCTCTACCGCCGGAAGTTCGTGCGTTCCTTAATGCCGGGAGAACGCGTTAA Protein sequence : MFWRDITLSVWRKKTTGLKTKKRLLPLVLAAALCSSPVWAEEATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVS IRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELAP ILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPA TLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEAEGTVG SGREIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFANGTQI PIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSI TTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLDVVFGER KLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTILRDGMAADGVSQRKYN YMRAEQIYRDEQGLSLMPHTAQPVLPAQNQALPPEVRAFLNAGRTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 0.0 | 99 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspD | YP_006125851.1 | type II secretion system lipoprotein D | VFG2047 | Protein | 0.0 | 99 |
