Gene Information

Name : gspH (ECW_m3231)
Accession : YP_006125847.1
Strain : Escherichia coli W
Genome accession: NC_017635
Putative virulence/resistance : Virulence
Product : type II secretion system lipoprotein H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3315398 - 3315961 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence :
GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTTCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA
GACTTTTGCGACCGATTCTGAATCGCCCGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACA
GGGCAGTGATCGAAGGGAAAACACTCGGTGTGCTAATCGACCCGCCTGGCTACCAGTTTATGCAGCGTCGTCAGGGGCAG
TGGTCGCCCGTTTCCTCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAG
TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAACGTCGTCGACTGACGCTGCACGATATTGAACTTGAGCTGCAAA
AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCG
GCGGCGCAAAACGCATGTTGGGCGGTAAAGCTGGCACACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCC
ATGA

Protein sequence :
MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGKTLGVLIDPPGYQFMQRRQGQ
WSPVSSTRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
AAQNACWAVKLAHDGALSLNQCDERMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspH CAE85230.1 GspH, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-78 99
gspH YP_854403.1 type II secretion protein GspH Not tested PAI I APEC-O1 Protein 2e-83 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspH YP_006125847.1 type II secretion system lipoprotein H VFG2051 Protein 9e-78 96