Gene Information

Name : gspJ (ECW_m3229)
Accession : YP_006125845.1
Strain : Escherichia coli W
Genome accession: NC_017635
Putative virulence/resistance : Virulence
Product : type II secretion system lipoprotein J
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3314428 - 3315033 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence :
GTGAGAAGGACTCGCGCTGGTTTCACGTTACTGGAAATGTTGGTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGC
GCAGCAGGTGACAAACGGTGTCACACGCGTGAATAACGCCGTCGCCGGACATGATCAAAAACTAAACCTCATGCAGCAAA
CGATGAGTTTTCTGACCCACGATCTGACACAAATGATGCCGCGTCCGGTAAGAGGCGAACAGGGCCAGCGTGAACCAGCG
TTACTGGCGGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGCATGCGCTTTGTGCGCGGCGGCGTGGTTAACCCGTTGAT
GCGTCTGCCACGCAGCAATCTGCTCACCGTCGGTTACCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCGCTGA
CCGATGCCGCAGGCAGCGTGAAGCCGACAATGCAAAAGTTGATTCCGGCGGATTCGCTCCGTTTGCAGTTCTATGATGGT
ACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCGATCCCTGTGGCAGTGCGCATGACTCTGCATTCGCCGCAATGGGG
CGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATCATGA

Protein sequence :
MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNNAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGEQGQREPA
LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG
TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 2e-89 97
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-84 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_006125845.1 type II secretion system lipoprotein J VFG2053 Protein 1e-85 98