Gene Information

Name : NRG857_20970 (NRG857_20970)
Accession : YP_006122536.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4468745 - 4469635 bp
Length : 891 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGTCGAAATTAAGTAAGCAGCTGGTTACGCTGGCAAGACAGGGAGGTGGTGGGTTCAAGACTATCGCAGATCGTTCAAA
GATTGCCTCTCGTGTAGCGGAGCGAATAGTTAAATTAAATATTCAGATCCGGGATGTGAAGCATATAAAAACCAATCATA
TTGAGCTGTATGTCAAGAGTCGCCAGGCCGAAGGGATATCTAAAAGAACAATGCAGAATGAGATGGCCGCAATCAGAAAT
ATGCTGACTGTTGCTGGTCGAACAAAACTTGCCGATCCTAATCATGAAAAATTAAGTAATTCAGCTCTCGGATTAGCAGA
TGCCAGTCGTGACGGTACTAAAGTCGCAATTAATAGCGAACGCTATCTCGCAGCGTTCGCTTATTCAGAGAAACAAGACG
TTGGCGTAGCAGCTGCAATGCAGGTTGCTCGTTGTTTTGGCCTGAGGACAGAAGAAGCGGTGCAATCTGTGAAATCATTA
AAAACCTGGCAACGTGCATTATCGCGTGGTGATGATCGTGTCAGGATCGTATTTGGTACAAAAGGAGGACGGCCAAGAGA
TACGACGGTTATAGAGCGCGATAAAATGCTAAGTGCTGTTAATCATGCTTTGAAAATCGCTGCCGAACAGAATGGTAAGT
TGGTTGATAAACCGGATCTGAAATCAGCGATTGATCGCTATCGAAATATTGTCAGAGATGCGGGATTAGTGGGGAAATAT
GCGCCTCATAGTCTGCGATATGCCTGGGCAGGTGAAGCAATGGAATATCATAAAAGTAAAGGTATGAGTGACGATGAGGC
AAAAGCAATGGTGTCTATGGATCTGGGACATGGTGATGGTCGAGGACGTTATATTGAGCGTGTCTATAATAAATCTGATA
TCGAGGAATAA

Protein sequence :
MSKLSKQLVTLARQGGGGFKTIADRSKIASRVAERIVKLNIQIRDVKHIKTNHIELYVKSRQAEGISKRTMQNEMAAIRN
MLTVAGRTKLADPNHEKLSNSALGLADASRDGTKVAINSERYLAAFAYSEKQDVGVAAAMQVARCFGLRTEEAVQSVKSL
KTWQRALSRGDDRVRIVFGTKGGRPRDTTVIERDKMLSAVNHALKIAAEQNGKLVDKPDLKSAIDRYRNIVRDAGLVGKY
APHSLRYAWAGEAMEYHKSKGMSDDEAKAMVSMDLGHGDGRGRYIERVYNKSDIEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 2e-88 63
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 6e-90 62
api85 CAF28559.1 putative integrase Not tested YAPI Protein 1e-60 59
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 5e-73 56
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 1e-61 50
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 1e-61 50
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 2e-62 49
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 2e-62 49
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 5e-55 48
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 5e-55 48