Gene Information

Name : NRG857_20835 (NRG857_20835)
Accession : YP_006122509.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4446385 - 4446951 bp
Length : 567 bp
Strand : +
Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence :
ATGGCAGCGCGTAAACTGATGTGGCTGGCAATGTTCATCGCACTGCCGGAGTGTCTGGCGGCGCAATCTGTTCCGGAAGG
ATATCACCGGGTTGCGCAGGCGGAAAATGTTCCTGCCGAAGCGCTGTATAGCCTAGCGCTGACGGAGTCATCCCGCAAGC
TGGCGCATGGCGTACGCCCGTGGCCGTGGACAATTAATGTTGCCGGGAAGGGATATCGCTACGCCTCCCGGAATGAAGCC
TATCAGGCGCTGTTAGGTTTTATGCGGCGCTATCCGCTCAAGCGTATTGATGTTGGTATTGCGCAAGTCAATCTGGGCTG
GAACGGCCACCATTTCACATCTACCTGGGAAGCATTTGATCCCTATACCAACCTGCACGTCGCCGCTCGTATTCTGCGAA
CATGTTACGAGCGTAGCCCCGGGAGCTGGATATCGGCTGCGGGGTGTTATCACCATCCGGCAGGCGGCAAATCAGCGCAA
ACCTATAAGGCTATCGTGTCGCGCCACCTGGGTACATTGCAGCCGTCTGTACAGACACTGGCGTTTAATCAGGGAGGAAC
ACAATGA

Protein sequence :
MAARKLMWLAMFIALPECLAAQSVPEGYHRVAQAENVPAEALYSLALTESSRKLAHGVRPWPWTINVAGKGYRYASRNEA
YQALLGFMRRYPLKRIDVGIAQVNLGWNGHHFTSTWEAFDPYTNLHVAARILRTCYERSPGSWISAAGCYHHPAGGKSAQ
TYKAIVSRHLGTLQPSVQTLAFNQGGTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 5e-51 74
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 5e-51 74
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 9e-47 68
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 5e-49 66
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 5e-47 61
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 4e-47 61
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 1e-25 49
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-28 49
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-26 45
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 2e-28 45
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 1e-26 41