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Name : NRG857_20800 (NRG857_20800) Accession : YP_006122502.1 Strain : Escherichia coli NRG 857C Genome accession: NC_017634 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 4439025 - 4441028 bp Length : 2004 bp Strand : + Note : COG0550 Topoisomerase IA DNA sequence : ATGAAGCTCTTTCTCTGCGAAAAACCCAGTCAGGGACGCGATATTGCCGCTGTGCTGGGTGCGACAAAGAAAATGCCGGG GCATCAAACCGGAAACGGCGTGTGCGTCACCTGGGGTTTTGGTCATCTGCTGGAGCAGGCCAGCCCGGACGCCTACGGTG AACAGTTCGGCGTTCCCTGGCGTACTGACGTGTTGCCGGTATTGCCGACAATGTGGCAAATGCGGGTTAAACCGGATGCA GCAGCTCAGTTCTCCGTCATCCAGAAACTGCTGAAACAGGCTGATACGGTAGTGATTGCCACCGATGCGGATCGGGAAGG AGAGGTGATTGCTCGTGAAATCCTCGATTATTGTCACTATCAGGGAAAAGTTGAGCGGTTATGGCTCTCGGCGCTGGATG AGGCCAGCGTTCGCGCCGCGCTGGCGACGATAAAGCCCGGAAGTACGACTTTACCCTACTATTTAGCCGGGCTTGGCCGC GCCCGGGCTGACTGGCAAATAGGTATGAACATGACGCGGCTATATTCGGTCAAGGCCCGGGAGAACGGCTACGGTAGCGT TTTATCCGTGGGGCGGGTGCAGACGCCGACGCTTAACCTGATCGTGGTACGCGATCGCGATATTGTGCAGTTTGTTCCGA AGCCCTACTGGAATGTTGTGGCGCAGCTGGCGGCGGGAGGAATTGCGTTTCAGGCGCAGTGGGTGCCAGCAGAGGCGTAT TGTGATGAGGAAAAACGCTGTATCAACCCGACAGCGGCGCAGCAGGTGGTTCAGCTTTGCCAGAAAACCGGACAGGCGAC GGTGGCAGAGGTTGAGACCAAAAGGGAAACGGAGTCTGCTCCGCTGGCATTTGATCTCGGTACGCTACAACAAGCCTGTT CCCGCCGTTTCGGTTATGGCGCTCAGCAGGTGCTGGATATTGCGCAGGCTTTGTATGAAACCTACAAAGCAACCACGTAC CCTCGTACCGATTGCGGCTACCTGCCAACATCCATGCGTGGCGAGATCGGACAGGTGATGTCTTCGATACAGCAAAGCGA TCCCGCTTTATCTGCGATCATCTCGCGGCTTGATATGAAGCATGTTTCCCGTATCTGGAATGACAAAAAAATCACCGCGC ACCACGGTATTATCCCGACGAAGCAACCCTGTGATCTGGCGAAAATGAGTGAGCAGGAGCGCAACGTTTACCAGCTTATC CGTCTGCATTATCTGGCCCAGTTCCTGCCGAACCATGAAGTGGATGCCACGCGGGTTTCGCTGCATTGTGGCGGTCAGTT ATTTAAGACCAGCGGTAAAGCTGTGGTCGTTGCTGGCTGGAAGAGTTTGTTTGGTAAGGATGCTGACGAGGATGCAGGCG ATGCCGGTGATAAAGCACGGTTACCTGCAATGGCTAAAGGGAGCTTGTGCCAGGTCACCGGCGCGGAAGCAAAACCGCAG CAGACAAAACCACCTGAGCACTATACGGAAGGGACGTTGATTGCAGCGATGAAGAATGCAGCGCAGTTCGTTACCGATCC GCGTCTTAAAAAGATCCTCAAAGAAAATGCGGGGCTGGGAACGGAAGCAACCCGGGCTGGAGTAATTGAAACGCTCCTGA AGCGTGGATTTGTGGTGAAGAAAGGCAAGCATCTGCTGGCGACACCTATCGCGGCTGATTTGATGGCTGTGTTACCGGCA CAGCTTAAAGATCCGGGTATGACGGCGCTCTGGGAGCAATCACTGGATGACATTGCTGAAGGCCGGATGTCGCTTGATGA CTTTATGGCGAAACAGTCAGCCTGGACAATGCAACTGGTGGCAAAGGGGCAGCATCAGACGGTTAAGATCACGTTACCAC CTTCTCCGCCGTGCCCGATCTGCGGTGGGGTAACGCGGCAGCGCACGGGGAAATCAGGCTCATTCTGGGGATGCGTCAAC TACCCTGACTGCAACGGGATTGTGAATGTCGGGGCGAAGAAGCCTGGTCGTCGGCGGAAAAGTCCGGCAAAGAAAAGTGT CTGA Protein sequence : MKLFLCEKPSQGRDIAAVLGATKKMPGHQTGNGVCVTWGFGHLLEQASPDAYGEQFGVPWRTDVLPVLPTMWQMRVKPDA AAQFSVIQKLLKQADTVVIATDADREGEVIAREILDYCHYQGKVERLWLSALDEASVRAALATIKPGSTTLPYYLAGLGR ARADWQIGMNMTRLYSVKARENGYGSVLSVGRVQTPTLNLIVVRDRDIVQFVPKPYWNVVAQLAAGGIAFQAQWVPAEAY CDEEKRCINPTAAQQVVQLCQKTGQATVAEVETKRETESAPLAFDLGTLQQACSRRFGYGAQQVLDIAQALYETYKATTY PRTDCGYLPTSMRGEIGQVMSSIQQSDPALSAIISRLDMKHVSRIWNDKKITAHHGIIPTKQPCDLAKMSEQERNVYQLI RLHYLAQFLPNHEVDATRVSLHCGGQLFKTSGKAVVVAGWKSLFGKDADEDAGDAGDKARLPAMAKGSLCQVTGAEAKPQ QTKPPEHYTEGTLIAAMKNAAQFVTDPRLKKILKENAGLGTEATRAGVIETLLKRGFVVKKGKHLLATPIAADLMAVLPA QLKDPGMTALWEQSLDDIAEGRMSLDDFMAKQSAWTMQLVAKGQHQTVKITLPPSPPCPICGGVTRQRTGKSGSFWGCVN YPDCNGIVNVGAKKPGRRRKSPAKKSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 64 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 64 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 64 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 57 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-178 | 53 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 1e-177 | 51 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 6e-166 | 51 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 7e-170 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 2e-123 | 41 |
