Gene Information

Name : NRG857_17000 (NRG857_17000)
Accession : YP_006121743.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : putative fimbrial chaperone AufB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3583174 - 3583953 bp
Length : 780 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGTTATTTCATCAACAAGGATGCTGTATGAAATGTATTATTGGAAATAAAAAATGGGTTTGTGGATTCAGGGATGAATT
AAAAGTATCACAAAATATTATACGCTCAGGGATTCTTTTTTTACTATCGATATTATTTATTAATAATGCGTCCGCGGGCG
GGTTTGGCCTTGGCGTAACGCGATTGATTTATCCGGCAGAAAGTAAGCAAATAACACTCAGTGTGCAAAATAGCGGTGAC
AACACCAGTTATTTAATTCAATCATGGGTTGATGACAGTAAAACGGAAAAAAAGAGCCAGGATTTTGTTATCACTCCTCC
CCTCTTTATGTTACCAACGCGTAAAGAAGCTTCATTACGTATCATGTTTCTTGGTAAGACTAATTTGCCGACCGATCGTG
AAACTTTGTATTGGATGAATGTTAAAGCAATTCCGCCAACAGATGAGAAAAATACACAGAAGAATACCTTACAGTTGGCA
TTACAAAACAAAATCAAGCTATTTTATCGCCCGGAAAATCTACCTGTGCAACCAGGAAAAGCACGAAATATGTTGCGGTT
TAAGTATGAGGGCAAACAACTAAAAGTTATCAATCCTTCGCCTTATTACCTGACACTGACAGGAATTAAAGTACAAGGGA
GTAAATTGCCCAATATGTTTGTACCACCGAAAAGTGATATTACGGTCTCGTCGCCAGTGACGTTGGCTGGTGAAATTACT
TATCAAACAATTAATGACTTTGGCGCTACGACGGAGCGGCAGAAAGGAATAATGCAGTAA

Protein sequence : 
MLFHQQGCCMKCIIGNKKWVCGFRDELKVSQNIIRSGILFLLSILFINNASAGGFGLGVTRLIYPAESKQITLSVQNSGD
NTSYLIQSWVDDSKTEKKSQDFVITPPLFMLPTRKEASLRIMFLGKTNLPTDRETLYWMNVKAIPPTDEKNTQKNTLQLA
LQNKIKLFYRPENLPVQPGKARNMLRFKYEGKQLKVINPSPYYLTLTGIKVQGSKLPNMFVPPKSDITVSSPVTLAGEIT
YQTINDFGATTERQKGIMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-46 47
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_17000 YP_006121743.1 putative fimbrial chaperone AufB VFG0911 Protein 1e-45 48
NRG857_17000 YP_006121743.1 putative fimbrial chaperone AufB VFG1644 Protein 2e-45 47
NRG857_17000 YP_006121743.1 putative fimbrial chaperone AufB VFG0875 Protein 6e-50 46
NRG857_17000 YP_006121743.1 putative fimbrial chaperone AufB VFG0445 Protein 3e-48 45
NRG857_17000 YP_006121743.1 putative fimbrial chaperone AufB VFG0455 Protein 3e-37 41