Gene Information

Name : NRG857_16490 (NRG857_16490)
Accession : YP_006121640.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : pseudopilin, cryptic, general secretion pathway
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3478361 - 3478798 bp
Length : 438 bp
Strand : +
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence : 
ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTGATCGTCATTATCGGCGTACTTGCCAG
CCTGGTGGTTCCCAACCTGATGGGCAATAAAGAAAAGGCGGATAAACAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAA
ACGCCCTGGATATGTACAAGCTCGACAATCATCGCTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTCGAAGCGCCG
ACACAGCCACTGCTGGCTGCAAACTATAACAAAGAAGGTTATATCAAGCGTCTGCCCGCCGATCCCTGGGGCAATGATTA
TGTCCTTGTTAATCCTGGTGAACACGGCGCATACGATCTGCTTTCAGCAGGGCCGGACGGTGAAATGGGAACCGAGGACG
ACATCACCAACTGGGGTTTGAGCAAGAAGAAAAAATAA

Protein sequence : 
MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHRYPTTNQGLESLVEAP
TQPLLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-39 65
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-39 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_16490 YP_006121640.1 pseudopilin, cryptic, general secretion pathway VFG2050 Protein 8e-40 65
NRG857_16490 YP_006121640.1 pseudopilin, cryptic, general secretion pathway VFG0180 Protein 4e-30 54
NRG857_16490 YP_006121640.1 pseudopilin, cryptic, general secretion pathway VFG1871 Protein 7e-30 51