|
Name : NRG857_14720 (NRG857_14720) Accession : YP_006121288.1 Strain : Escherichia coli NRG 857C Genome accession: NC_017634 Putative virulence/resistance : Virulence Product : inner membrane lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 3115357 - 3119787 bp Length : 4431 bp Strand : - Note : - DNA sequence : TTGCCGGAAGTGAAACCCGATCCAACACCAACCCCGGAGCCGACACCTGAGCCGACGCCGGACCCAGAACCTACGCCGGA TCCAACACCTGATCCTGAGCCGACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCG GAAGCCAGCGGGTAACTGGTGCTACCTGTAATGGTGAATCCAGCGATGGCTTTACCTTTACGCCAGGCAATACCGTGAGT TGTGTGGTGGGCAGTACGACCATTGCAACATTCAACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGACAAAGT GTCGTTTAGCCTGGAGGACGCGCAGGAGCTGGCGAATTCTGAAAATAAGAAAACCAACGCCATCTCTCTGGTGACGTCCA GCGACAGTTGCCCCGCAGATGCAGAACAGCTTTGTCTTACTTTCTCGTCAGTGGTTGATCGCGCGCGATTTGAAAAACTG TATAAGCAAATTGATCTGGCAACAGACAATTTCAGCAAGCTGGTCAATGAAGAGGTGGAAAACAATGCTGCGACTGATAA AGCGCCGTCCACCCATACCTCAACGGTAGTGCCAGTCACGACAGAGGGAACAAAACCGGATCTGAACGCGTCCTTCGTGT CGGCTAACGCGGAACAGTTTTATCAGTATCAACCCACTGAAATCATTCTTTCCGAAGGCCAACTGGTGGATAGCCTGGGG AACGGTGTTGCTGGCGTTGACTACTACACCAATTCAGGCCGTGGCGTAACTGACGAAAACGGTAAATTCTCCTTTAGCTG GGGCGAAACCATCTCCTTTGGTATCGATACCTTTGAACTGGGCTCAGTACGTGGCAATAAGTCGACCATTGCGCTGACTG AATTGGGTGATGAAGTTCGCGGGGCAAATATCGATCAGCTCATTCATCGTTATTCGACGACTGGTCAAAATAATACTCGT GTTGTTCCGGACGATGTACGCAAGGTCTTTGCCGAATATCCCAACGTGATCAACGAGATAATCAATCTCTCGTTATCCAA TGGTGCGACGCTGGATGAAGGCGATCAAAATGTTGTGCTGCCTAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCA AAGAGATCGATACCGCGATTTGTGCGAAAACCGACGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACAACGCGCAATGTT AATGACGGCCAGATTCAGGGCGTTATTAACAAGCTGTGGGGCGTGGATACGAACTATCAGTCTGTCAGCAAGTTCCACGT CTTCCATGACTCTACCAACTTCTATGGCAGCACCGGTAACGCGCGCGGTCAGGCGGTGGTAAATATCTCCAACTCGGCAT TCCCGATTCTGATGGCGCGTAATGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAATGAGCTG GCGTACATTACGGAAGCGCCTTCCATTGTGCAGCCAGAGAACGTTACGCGCGATACTGCGACTTTCAACCTGCCGTTTAT TTCGCTGGGGCAAGTCGGTGAAGGCAAACTGATGGTTATCGGTAACCCGCACTACAACAGCATCCTGCGTTGCCCGAACG GTTACAGTTGGGGCGGTGGTGTTAATAGTAAAGGTGAGTGTACGCTCAGCGGTGATTCTGATGACATGAAGCACTTTATG CAGAACGTCCTGCGCTACTTGTCAAATGACATCTGGCAGCCAAATACCAAGAGCATCATGACTGTCGGCACCAACCTGGA GAACGTTTATTTCAAAAAAGCGGGCCAGGTATTGGGAAATAGTGCACCATTTGCTTTCCATGAGGATTTCACTGGTATCA CGGTTAAACAGTTGACCAGCTATGGCGATCTGAATCCGGAAGAGATTCCGTTGCTGATCCTCAACGGCTTTGAATATGTG ACTCAGTGGTCTGGCGATCCCTATGCTGTGCCTCTGCGTGCAGATACCAGCAAACCGAAGCTGACTCAGCAGGATGTGAC CGATCTGATCGCTTATCTGAACAAAGGTGGCTCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCG CGTCCAGTTTTGTGCGTCTGCTGGATGCCGCGGGTCTGTCAATGGCTCTGAACAAATCGGTGGTGAACAACGATCCGCAA GGGTATCCGGATCGCGTTCGTCAGCGTCGCGCGACTGGCATTTGGGTTTATGAACGTTATCCTGCTGCAGACGGCGCGCA ACCGCCGTACACCATCGACCCAAATACAGGGGAAGTGACCTGGAAATACCAGCAAGACAACAAGCCTGATGACAAGCCGA AACTGGAAGTTGCGAGCTGGCAGGAGGAAGTTGAGGGCAAACAGGTAACGCGTTATGCCTTTATTGATGAAGCGGAATAC ACAACAGAAGAATCTCTGGAAGCGGCAAAGGCAAAAATCTTTGAGAAGTTTCCTGGGTTACAGGAGTGTAAGGACTCGAC TTACCATTACGAGATTAACTGTTTGGAGCGCCGCCCAGGCACGGATGTTCCGGTAACAGGTGGCATGTATGTTCCGCGCT ATACGCAACTGAATCTTGACGCCGACACCGCGAAAGCGATGGTGCAGGCGGCGGATTTAGGCACCAACATTCAGCGCCTG TATCAGCATGAGCTTTATTTCCGTACCAAAGGCAGTAAAGGTGAGCGTCTGAACAGTGTTGATCTGGAACGTCTGTACCA GAACATGTCGGTCTGGCTGTGGAACGATACGAAATATCGTTACGAAGAGGGCAAGGAAGATGAGCTGGGCTTTAAAACGT TCACCGAGTTCCTGAACTGCTACGCCAATGATGCCTATGCAGGCGGCACCAAGTGCTCCGCAGATCTGAAAAAATCGCTG GTCGATAACAACATGATCTACGGTGACGGTAGCAGCAAAGCGGGCATGATGAACCCAAGCTATCCGCTCAACTATATGGA AAAACCGCTGACGCGTCTGATGCTGGGCCGTTCCTGGTGGGATCTGAACATTAAGGTTGATGTGGAGAAGTACCCTGGAG CGGTATCTGTAGGGGGAGAAGAGGTTACTGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATG CAGTCAACTGGCCTGTGGGCACCGGCTCAGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGT GGCGCTGGCTGACGACCTGACCGGACGTGAGAAGCATGAAGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACGTACT CTCTGGACGCTAGCGGTACGGTGAAGTTCAAGGTGCCTTACGGTGGCCTGATTTATATCAAGGGCAATAGCTCTACCAAT GAATCTGCCAGCTTCACCTTTACTGGCGTGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTC TCCTGCCCCGCTGGGCGAACTGGAGTCTGCGTCGTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACA CGGGCGGACTGGATCAATTCGCTAAAGATCTGGATACCTTTGCCAGCTCGATGAATGATTTCTACGGTCGTAATGATGAA GACGGTAAGCACCGGATGTTTACCTATAAAAACTTGACGGGCCACAAGCATCGTTTCACAAACGATGTGCAGATCTCCAT CGGTGATGCGCACTCTGGTTATCCGGTAATGAACAGCAGCTTCTCGACGAACAGCACCACGCTGCCGACGACGCCGCTGA ACGACTGGCTGATTTGGCACGAAGTCGGTCATAACGCTGCAGAAACACCGCTGAACGTACCGGGTGCAACTGAAGTGGCG AACAACGTGCTGGCGCTGTACATGCAGGATCGCTATCTCGGCAAGATGAACCGTGTCGCTGACGACATTACCGTCGCGCC GGAATATCTGGAGGAGAGCAACGGTCAGGCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCGCAGCTGA AAGAGTGGGCAGAGAAAAACTTTGATATCAAACAGTGGTATCCAGAAGGTGACCTGCCTAAGTTCTACAGCGATCGTAAA GGGATGAAGGGCTGGAACCTGTTCCAGTTGATGCACCGTAAAGCGCGCGGCGATGATGTCAGCAATGACAAGTTTGGCGG CAGAAATTACTGTGCTGAGTCAAACGGTAACGCTGCTGACACGCTGATGCTGTGTGCATCCTGGGTCGCTCAGGCGGATC TTTCGGAATTCTTTAAGAAATGGAATCCGGGCGCAAATGCTTACCAGCTTCCGGGGGCAAGTGAGATGAGCTTCGAAGGC GGAGTGAGCCAGTCGGCTTACAACACGCTCGCGTCGCTCAAGCTGCCGAAACCGGAACAGGGGCCGGAAACCATTAACAA GGTTACCGAGCATAAGATGTCTGCCGAGTAA Protein sequence : MPEVKPDPTPTPEPTPEPTPDPEPTPDPTPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFTPGNTVS CVVGSTTIATFNTQSEAARSLRAVDKVSFSLEDAQELANSENKKTNAISLVTSSDSCPADAEQLCLTFSSVVDRARFEKL YKQIDLATDNFSKLVNEEVENNAATDKAPSTHTSTVVPVTTEGTKPDLNASFVSANAEQFYQYQPTEIILSEGQLVDSLG NGVAGVDYYTNSGRGVTDENGKFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTR VVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGDQNVVLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNV NDGQIQGVINKLWGVDTNYQSVSKFHVFHDSTNFYGSTGNARGQAVVNISNSAFPILMARNDKNYWLAFGEKRAWDKNEL AYITEAPSIVQPENVTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWGGGVNSKGECTLSGDSDDMKHFM QNVLRYLSNDIWQPNTKSIMTVGTNLENVYFKKAGQVLGNSAPFAFHEDFTGITVKQLTSYGDLNPEEIPLLILNGFEYV TQWSGDPYAVPLRADTSKPKLTQQDVTDLIAYLNKGGSVLIMENVMSNLKEESASSFVRLLDAAGLSMALNKSVVNNDPQ GYPDRVRQRRATGIWVYERYPAADGAQPPYTIDPNTGEVTWKYQQDNKPDDKPKLEVASWQEEVEGKQVTRYAFIDEAEY TTEESLEAAKAKIFEKFPGLQECKDSTYHYEINCLERRPGTDVPVTGGMYVPRYTQLNLDADTAKAMVQAADLGTNIQRL YQHELYFRTKGSKGERLNSVDLERLYQNMSVWLWNDTKYRYEEGKEDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSL VDNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSVGGEEVTETISLYSNPTKWFAGNM QSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGNSSTN ESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELESASFVYTTPKKNLNASNYTGGLDQFAKDLDTFASSMNDFYGRNDE DGKHRMFTYKNLTGHKHRFTNDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLNVPGATEVA NNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEWAEKNFDIKQWYPEGDLPKFYSDRK GMKGWNLFQLMHRKARGDDVSNDKFGGRNYCAESNGNAADTLMLCASWVAQADLSEFFKKWNPGANAYQLPGASEMSFEG GVSQSAYNTLASLKLPKPEQGPETINKVTEHKMSAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 87 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NRG857_14720 | YP_006121288.1 | inner membrane lipoprotein | VFG0106 | Protein | 0.0 | 49 |
