Gene Information

Name : NRG857_14675 (NRG857_14675)
Accession : YP_006121279.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : putative type II secretion protein (GspI-like)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3106718 - 3107089 bp
Length : 372 bp
Strand : -
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence :
ATGAAGCGTGGATTTACCTTGCTGGAAGTAATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCAAATCCTTGAGGAAAAAACGGTAGCGGGTTGGGTAGCTGAAAATCAGACCGCGC
TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG
CGAACCACACCGCTGAATACCGGTAACGTGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGACGACTTTTCGCC
AGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGGCAACAGTGA

Protein sequence :
MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTTPLNTGNVLLQAVDIEVSLHDDFSPVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 2e-42 98
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-42 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_14675 YP_006121279.1 putative type II secretion protein (GspI-like) VFG2052 Protein 6e-42 93