|
Name : NRG857_14665 (NRG857_14665) Accession : YP_006121277.1 Strain : Escherichia coli NRG 857C Genome accession: NC_017634 Putative virulence/resistance : Virulence Product : type II secretion protein GspK Function : - COG functional category : - COG ID : - EC number : - Position : 3105142 - 3106119 bp Length : 978 bp Strand : - Note : COG3156 Type II secretory pathway, component PulK DNA sequence : ATGATCACCTTACCACCAAAACGCGGAATGGCACTGGTCGTGGTGCTGGTATTGCTGGCGGTTATGATGCTGGTGACCAT CACGCTTTCCGGGCGGATGCAGCAACAACTTGGGCGAACGCGCAGCCAGCAGGAGTACCAGCAGGCGCTGTGGTACAGCG CCAGTGCAGAAAGCCTGGCGCTGAGCGCGCTCAGTCTGAGCCTGAAAAATGAAAAGCGTGTGCATCTGGCACAACCGTGG GCTTCTGGCCCGCGTTTTTTCCCACTGCCGCAGGGGCAAATCGCCGTCACTCTGCGTGACGCACAGGCCTGCTTTAACCT GAATGCCCTCGCTCAGCCGACGACGGCGTCGCGTCCGCTCGCGGTACAACAACTGATTGCCCTGATCTCGCGCCTTGATG TACCTGCTTATCGGGCCGAACTGATAGCCGAAAGCCTGTGGGAGTTTATTGACGAAGACCGCAGCGTGCAGACGCGTCTG GGTCGTGAAGACAGCGAGTATCTCGCCCGCTCGGTGCCGTTCTACGCCGCTAATCAACCGCTGGCTGATATCAGCGAGAT GCGCGTGGTGCAGGGAATGGACGCCGGGCTTTATCAAAAACTGAAACCGTTGGTCTGTGCGCTGCCGATGACCCGCCAGC AAATCAACATCAACACCCTGGACGTCACGCAAAGCGTGATTCTTGAGGCGCTGTTTGACCCGTGGTTAAACCCTGTACAG GCGCGGGCGTTATTACAACAACGTCCGGCGAAGGGCTGGGAAGATGTCGAGCAGTTTCTTGCACAGCCGCTACTTGCTGA CGTCGATGAGCGTACTAAAAAACAGCTAAAAACCGTCCTGAGCGTGGACAGCAATTACTTCTGGCTGCGTTCAGATATCA CCGTGAATGAGATTGAACTGACGATGAATTCGTTAATTGTCCGCATGGGCCCACAACACTTTTCTGTTCTCTGGCATCAG ACAGGAGAAAGTGAGTGA Protein sequence : MITLPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLALSALSLSLKNEKRVHLAQPW ASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFDPWLNPVQ ARALLQQRPAKGWEDVEQFLAQPLLADVDERTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQ TGESE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspK | YP_854400.1 | type II secretion protein GspK | Not tested | PAI I APEC-O1 | Protein | 5e-126 | 99 |
| gspK | CAE85227.1 | GspK, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-126 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NRG857_14665 | YP_006121277.1 | type II secretion protein GspK | VFG2054 | Protein | 1e-125 | 98 |
