Gene Information

Name : NRG857_14645 (NRG857_14645)
Accession : YP_006121273.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding protein kpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3100809 - 3101483 bp
Length : 675 bp
Strand : -
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATTAAGATTGAAAATTTGACGAAGTCATATCGCACGCCAGCGGGTCGACATTATGTCTTTAAGGATTTAAACCTCGA
AATCCCTTCAGGAAAAAGTGTCGCCTTTATTGGTCGCAACGGAGCGGGTAAATCAACGTTACTGAGAATGATTGGCGGCA
TTGACCGCCCCGACAGTGGAAAGATCATCACTAATAAAACAATATCATGGCCAGTCGGCCTCGCAGGTGGATTTCAGGGA
AGTTTAACCGGACGCGAAAACGTAAAATTTGTTGCGCGGTTATACGCGAAGCAAGAAGAACTGAAAGAGAAAATTGAGTT
TGTTGAAGAATTTGCCGAACTCGGTAAGTACTTCGATATGCCGATCAAAACTTACTCATCTGGTATGCGATCGCGTTTAG
GCTTCGGTTTAAGCATGGCATTTAAGTTTGATTATTATATCGTCGATGAAGTAACCGCAGTCGGTGATGCCAGGTTTAAA
GAAAAATGTGCTCAATTGTTTAAAGAAAGGCATAAAGAATCTAGTTTTTTGATGGTTTCACATAGTTTGAATTCGTTGAA
AGAGTTTTGTGATGTGGCCATTGTGTTTAAAGACGATAATGCGGTTAGTTTTCATGAGGATATTCAGGAGGGGATAGAGG
AGTATAAAAACAACATAACAATTAATACATATTGA

Protein sequence : 
MIKIENLTKSYRTPAGRHYVFKDLNLEIPSGKSVAFIGRNGAGKSTLLRMIGGIDRPDSGKIITNKTISWPVGLAGGFQG
SLTGRENVKFVARLYAKQEELKEKIEFVEEFAELGKYFDMPIKTYSSGMRSRLGFGLSMAFKFDYYIVDEVTAVGDARFK
EKCAQLFKERHKESSFLMVSHSLNSLKEFCDVAIVFKDDNAVSFHEDIQEGIEEYKNNITINTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-74 74
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-69 71
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 5e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_14645 YP_006121273.1 Polysialic acid transport ATP-binding protein kpsT VFG1449 Protein 5e-70 71
NRG857_14645 YP_006121273.1 Polysialic acid transport ATP-binding protein kpsT VFG0696 Protein 4e-44 45
NRG857_14645 YP_006121273.1 Polysialic acid transport ATP-binding protein kpsT VFG0258 Protein 2e-42 43
NRG857_14645 YP_006121273.1 Polysialic acid transport ATP-binding protein kpsT VFG2563 Protein 5e-39 42