Gene Information

Name : xerD (NRG857_14205)
Accession : YP_006121188.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3014075 - 3014971 bp
Length : 897 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGAAACAGGATCTGGCACGCATCGAGCAGTTTCTTGATGCTCTGTGGCTGGAAAAAAATCTGGCTGAAAATACGTTGAA
CGCTTACCGTCGCGATCTGTCAATGATGGTGGAGTGGTTGCATCACCGCGGGTTGACGCTGGCGACGGCGCAAAGTGACG
ATTTGCAGGCATTACTGGCAGAACGGCTGGAGGGCGGGTATAAAGCCACCAGCTCAGCGCGTTTGCTGAGTGCAGTGCGC
CGATTGTTCCAGTATCTTTATCGCGAAAAGTTTCGTGAAGATGATCCCAGTGCGCATCTCGCTTCACCGAAATTGCCCCA
GCGTTTGCCAAAAGATTTAAGCGAAGCGCAGGTCGAACGTTTATTACAGGCACCATTAATTGATCAGCCACTGGAGCTAC
GCGATAAAGCCATGCTTGAAGTGTTGTATGCTACCGGACTGCGTGTCTCTGAACTGGTCGGGCTGACAATGAGTGATATC
AGCCTGCGTCAGGGCGTGGTGCGGGTCATTGGTAAAGGCAACAAAGAGCGCCTGGTGCCGTTAGGTGAAGAGGCGGTTTA
CTGGCTGGAAACCTATCTGGAACATGGGCGTCCGTGGCTGTTGAATGGTGTGTCAATTGACGTGTTGTTTCCCAGCCAGC
GTGCGCAGCAGATGACGCGACAGACCTTCTGGCACCGCATTAAACATTATGCCGTGCTGGCGGGTATCGACAGCGAAAAG
CTGTCACCGCATGTGTTGCGTCACGCTTTTGCCACTCACTTATTAAATCATGGTGCGGATTTACGCGTGGTGCAGATGCT
ACTGGGCCACAGCGATCTCTCCACCACGCAAATTTATACGCATGTCGCTACCGAGCGTCTGCGACAACTTCATCAACAGC
ATCACCCGCGGGCGTGA

Protein sequence :
MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVR
RLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-61 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-61 54