Gene Information

Name : NRG857_13815 (NRG857_13815)
Accession : YP_006121109.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : putative CLPA/B-type chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2907151 - 2909787 bp
Length : 2637 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGACAGGAAATCACCCCGCCGCGCTGCTGCGTCGCCTTAACCCATACTGTGCACGGGCGCTGGACGCTGCCGCCTCACT
GTGTCAGACCCGCGCCCATGCGGAGATAACCATTGAACACTGGCTGCTGAAACTGCTGGAGCAGGGAGAAGGCGATATCA
CGGTGATTGCCCGCCGCTATGAATGGGATATCGACACGCTCTGGCAGTCTCTGCTGGCACATCTGGACACCTTACCCCGC
TCGGTCCGCGAACGTCCGCAGCTTTCTGAACCCCTGACGGCGCTTATCAGGCAGGCGTGGCTGATTGCCTCGCTGGAAGG
CGACGACCCGCAAATCCGCAGTCAGCACCTGCTGATGGCGCTGACAGAAAAATCGATGCTGCCCGCCTGTAATGACCTGT
GGGTATTGCTGAGTCTGAGCCGCGTGCAGCTTGAGCGGCTGCGTCCCCTGCTGGATGCGCAGTCGGATGAATGTCCGGCA
CGTCAGCCACAGGTCACCGAACCGCTGACCTCTGCACTGCCGGAGACGGCAACGGCGGACGCACCGGCAAAAACGCTGAC
GGAGAAACAGGATGACGCCCTGCTGGCGGTGCTTAACCGCTTTACCGAAGACGTGACGGAAAAAGCCCGCAGCGGGCGAA
TCGACCCGGTATTCGGGCGCGACACGGAAATTCGCCAGATGGTCGATATCCTCTCCCGTCGCCGCAAAAACAACCCGATT
CTGGTGGGAGAACCGGGGGTGGGCAAAACCGCGCTGGTGGAAGGGCTGGCGCTGCGTATCACCGAAGGCAACGTGCCGGA
CAGCCTGAAAACGGTGCATATCCGCACACTGGACCTCGGTCTGTTACAGGCTGGCGCGGGCGTTAAAGGTGAATTTGAAC
AGCGGCTGAAAAATGTCATCGATGCAGTGCAGAAATCACCGGAGCCGGTACTGCTGTTTATTGATGAAGCCCATACCATT
ATCGGTGCGGGTAATCAGGCAGGCGGCGCGGATGCGGCGAACCTGCTGAAACCGGCACTGGCAAGGGGCGAACTGCGCAC
CATCGCGGCGACCACGTGGAGCGAATACAAACAGTATTTTGAGCGCGACGCCGCGCTGGAGCGCCGCTTCCAGATGGTTA
AGGTTGACGAGCCGGATGATGACACCGCCTGTCTGATGCTGCGGGGACTGAAGGCTCGCTATGCACAGCACCACGGCGTG
CATATGCTGGACAGCGCCATTCAGACCGCCGTGCGCCTGTCGCGCCGCTATCTGACCGGACGCCAGCTGCCGGACAAGGC
GGTTGATTTGCTGGATACCGCCGGGGCAAGAGTCCGCATGAGCCTTGACACCCTGCCGGAACCGTTGACGCAGCTTCATG
CGCGACTGGCGGCACTGGATATTGAGCGGGAAGCGATTGAGCAGGACAGCGTATTTTATCCCGAAGCCAGCCCGGAGCGG
CTGGCGGAACTGACCGATTTGCGTGATGAGCTACAGGCAGAAGCCGGGCATCTGGAAGCGCAGTATCAGCAGGAAAAGGC
ACTGGCGCAGCAGATTATGACGTTGCGTCAGGAAGGAACAGACAGCACTGAACTGCAACAGCAACTGCGAACGCATCAGG
GCTTTGCACCGCTGCTGGCGCTGGATGTGGACGCCCGCGCCGTCGCCACGGTGGTGGCGGACTGGACCGGCATCCCGCTA
TCTTCCCTGCTCAAGGACGAGCAGAGCGACCTGCTCAGTATGGAACAGAGTCTTGAAAACCGCGTTGTCGGGCAAAGCCC
GGCGCTCTGCGCCATCGCACAGCGGCTGCGGGCGGCTAAGACCGGCCTCACGCCGGAGAACGGCCCGCAGGGGGTATTCC
TGCTGACCGGCCCCAGCGGCACCGGTAAAACCGAAACTGCGCTCACACTGGCCGACACTCTGTTTGGCGGTGAAAAATCC
CTTATCACCATCAACCTCTCCGAATATCAGGAGCCGCATACCGTCTCCCAGCTTAAGGGGTCTCCTCCGGGCTACGTTGG
CTACGGTCAGGGTGGCGTACTCACCGAAGCCGTTCGCAAACGCCCTTACAGCGTGGTGCTGCTCGACGAAGTGGAAAAGG
CGCACCGCGACGTAATGAACCTGTTCTATCAGGTATTTGACCGGGGCTTTATGCGCGACGGCGAAGGCCGGGAAATTGAC
TTCCGCAACACCGTGATTCTGATGACGGCTAATCTGGGCAGCGACCACATCATGCAACTGCTGGAGGAAAAACCGGACGC
CACGGACGCAGACCTGCATGAACTGCTGTATCCCCTGCTGCGCGAGCACTTCCAGCCAGCACTGATGGCGCGTTTTCAGA
CGGTGATTTACCGCCCGCTGGGACAGGAGGCGATGCGCGCCATTGTGGAAATGAAACTGGCGCAGGTGGCCCGCCGTCTT
CACCAGCACTATGGGCTGGAAACGGAAATCAGTAACAGCCTGTACGACGCCCTGACCGCCGCCTGCCTGCTGCCGGACAC
CGGTGCGCGTAATATCGACAGCCTGCTGAACCAGCAAATCCTGCCGGTCTTAAGCCAGCAGTTGCTGGCGCAGCAGGCCG
TGCATCATAAGCCTGCCCGACTGCGGCTTGACTGGGATGATGAAGACGGGATTGTGCTGGAATTTGATGAGAAATAA

Protein sequence :
MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSLLAHLDTLPR
SVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMALTEKSMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPA
RQPQVTEPLTSALPETATADAPAKTLTEKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI
LVGEPGVGKTALVEGLALRITEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEAHTI
IGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGV
HMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEASPER
LAELTDLRDELQAEAGHLEAQYQQEKALAQQIMTLRQEGTDSTELQQQLRTHQGFAPLLALDVDARAVATVVADWTGIPL
SSLLKDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKS
LITINLSEYQEPHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREID
FRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLREHFQPALMARFQTVIYRPLGQEAMRAIVEMKLAQVARRL
HQHYGLETEISNSLYDALTAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAVHHKPARLRLDWDDEDGIVLEFDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-142 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_13815 YP_006121109.1 putative CLPA/B-type chaperone protein VFG2076 Protein 4e-149 44
NRG857_13815 YP_006121109.1 putative CLPA/B-type chaperone protein VFG2084 Protein 5e-132 43
NRG857_13815 YP_006121109.1 putative CLPA/B-type chaperone protein VFG0079 Protein 3e-101 41