|
Name : NRG857_13385 (NRG857_13385) Accession : YP_006121024.1 Strain : Escherichia coli NRG 857C Genome accession: NC_017634 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : - COG ID : - EC number : - Position : 2815353 - 2817914 bp Length : 2562 bp Strand : + Note : COG0249 Mismatch repair ATPase (MutS family) DNA sequence : ATGAGTACAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAAGCTGAAAGCCCAGCATCCCGAGAT CCTGCTGTTTTACCGGATGGGCGACTTTTATGAACTGTTTTATGACGACGCAAAACGGGCGTCGCAACTGCTGGATATTT CACTGACCAAACGCGGTGCTTCAGCGGGAGAGCCAATCCCGATGGCGGGGATTCCCTACCATGCGGTGGAAAACTACCTC GCCAAACTGGTGAACCAGGGCGAATCGGTTGCTATTTGTGAACAGATTGGCGATCCGGCGACCAGCAAAGGGCCGGTCGA GCGCAAAGTTGTCCGTATCGTTACGCCGGGCACCATCAGCGATGAAGCGCTGTTGCAGGAACGTCAGGACAACCTGCTGG CGGCTATCTGGCAGGACAGTAAAGGTTTCGGCTACGCAACGCTGGATATCAGTTCCGGTCGTTTTCGCCTGAGCGAACCG GCGGACCGCGAAACGATGGCGGCAGAACTGCAACGTACGAATCCAGCGGAATTACTGTATGCGGAAGATTTCGCCGAGAT GTCGCTGATTGAAGGTCGCCGCGGCCTGCGTCGTCGCCCGCTGTGGGAGTTTGAAATCGACACCGCTCGCCAGCAATTGA ACCTGCAATTTGGCACCCGAGATCTGGTCGGTTTTGGTGTGGAGAACGCACCACGCGGACTTTGTGCTGCCGGTTGTCTG TTGCAGTATGCGAAAGATACCCAACGCACGACCCTGCCGCATATTCGTTCTATCACTATGGAACGTCAGCAGGACAGCAT CATTATGGATGCCGCGACGCGTCGTAACCTGGAAATTACTCAGAACCTGGCCGGCGGTGCGGAAAATACGCTGGCTTCCG TACTCGACTGCACTGTAACGCCGATGGGTAGTCGTATGCTGAAACGCTGGCTGCATATGCCAGTGCGCGATACCCGCGTG TTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGAGTTACAGCCGGTACTGCGTCAGGTGGGCGA CCTGGAACGTATTCTGGCGCGTCTGGCGTTGCGTACCGCTCGCCCGCGCGATCTGGCCCGTATGCGTCACGCTTTCCAGC AACTGCCAGAGTTGCGTGCGCAGTTAGAAAATGTCGATAGTGCACCGGTACAAGCGCTGCGTGAGAAGATGGGCGAGTTT GCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCACCGGTGCTGGTACGCGACGGTGGTGTTATCGCATC GGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAGGTCCGCG AGCGTGAACGTACCGGCCTGGACACGCTGAAAGTTGGCTTTAATGCGGTGCACGGCTACTACATTCAAATCAGCCGTGGG CAAAGCCATCTGGCACCAATCAACTACATGCGTCGCCAGACGCTGAAAAACGCCGAGCGTTACATTATTCCGGAGCTGAA AGAGTACGAAGATAAAGTTCTCACCTCAAAAGGCAAAGCACTGGCTCTGGAAAAACAACTTTATGAAGAGCTGTTCGACC TGCTGTTGCCGCATCTGGAAGCGTTGCAACAGAGCGCGAGCGCGCTGGCGGAACTCGACGTGCTGGTGAACCTGGCGGAA CGGGCCTATACCCTGAACTACACCTGCCCGACCTTTATTGATAAACCTGGCATTCGCATTACCGAAGGTCGCCATCCGGT AGTTGAACAAGTACTGAATGAGCCGTTTATCGCTAACCCGCTAAACCTGTCGCCGCAACGTCGCATGTTGATCATTACCG GTCCGAACATGGGCGGTAAAAGTACCTATATGCGCCAGACCGCGTTGATTGCGCTGATGGCGTATATCGGCAGCTACGTA CCGGCGCAAAAAGTCGAGATTGGCCCGATTGACCGTATCTTTACCCGCGTAGGTGCCGCGGATGATCTGGCTTCCGGGCG TTCAACCTTTATGGTGGAGATGACCGAAACCGCCAATATTTTACATAACGCCACCGAATATAGTCTGGTGTTGATGGATG AGATCGGGCGTGGAACGTCCACTTACGATGGTCTGTCGCTGGCGTGGGCGTGTGCGGAAAATCTGGCAAATAAGATCAAA GCGTTGACGCTGTTTGCTACCCACTATTTCGAGCTGACCCAGTTACCGGAGAAAATGGAAGGCGTCGCCAACGTGCATCT CGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCATAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGG CGGTTGCAGCGCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAACTGCGTGAGCTGGAAAGCATTTCG CCGAACGCCGCTGCTACGCAAGTGGATGGTACACAAATGTCTTTGCTGTCCGTACCGGAAGAAACTTCGCCTGCGGTCGA GGCACTGGAAAACCTCGACCCAGATTCACTGACTCCGCGTCAGGCGCTGGAGTGGATTTATCGCTTGAAGAGTCTGGTGT AA Protein sequence : MSTIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYL AKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCL LQYAKDTQRTTLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRV LLERQQTIGALQDFTAELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLENVDSAPVQALREKMGEF AELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRG QSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAE RAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYV PAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIK ALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESIS PNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 90 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NRG857_13385 | YP_006121024.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 96 |
