Gene Information

Name : NRG857_09885 (NRG857_09885)
Accession : YP_006120332.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : AraC type regulator of yersiniabactin gene cluster (HPI)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2022793 - 2023752 bp
Length : 960 bp
Strand : +
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence :
ATGATGGAGTCACCGCAAACGCAATCTGAAATCTCTATTCACCAGTTGGTGGTCGGGAAACCTGCAAACGATGGCAATAT
TCCTGCTCAGTGTGAACTGCTGCGCTGTTCGTTGCAGGAAGGTATGGATATTTTGCTCTGGAGGGGCCATTTTGCGCGGC
CTGAGACGTTGCAGCTACACGACGATCTGGGCAGGATTAACTTCTCGTGCATCCTGGAAGGCACATCGCGCTTTGCGATT
CAGGGACTCCGGCGCCACACCGACTGGGAGCTTGCGCGCAATCGCCATTACATTACCCATACGCCAGACTGTCGCGGCAG
CGCCTCCTATTGTGGCCGATTCGAGAGCATTACCCTCTCCTTCAGCCCTGAAACCCTCGCGCTGTGGGTGCCGGATATTA
GCGCGGTCATTAAGAATAAGATCGACTCCCACTGCTGTTGCCAGCAGCACCGTTGTAATGCTGAAACCCACTTAACGGCT
CAGGCCTTGCGTCACGCGCTGATGCGCATGCACGGCGGCTTCAGTCATGAACAAAAGCCGTCGACGCTATGGTTGCAGGG
GCAAAGTCTGGTCATGCTCAGTCTGGTGCTGGATGAACATCGCGAAGACGCCAGTTGCCTCTCCTGCCACTTCAACCCGA
TGGAACGCCAGAAACTGCTGCGGGCGAAGGATCTGCTGCTGGCTGATCTGACGCAAGCGCCGGGCGTCGCGGAGCTGGCC
AGAGAGTCCGGTCTGAGCGTTCTCAAAATTAAGCGAGGCTTCCGCGTTCTGTTCAACAACAGCGTCTATGGCCTGTTTCA
GGCTGAACGAATGCAGGAAGCCAGAAGACGCCTGGCCAACGGCAATACCTCCGTCATGACGGTGGCGGCCGATCTGGGCT
ATGCCAACGCCAGCCATTTCTCTGCCGCCTTCCAGAAACAGTTTGGCGTAACTCCTTCGACCTTTAAACGCGGGATGTAA

Protein sequence :
MMESPQTQSEISIHQLVVGKPANDGNIPAQCELLRCSLQEGMDILLWRGHFARPETLQLHDDLGRINFSCILEGTSRFAI
QGLRRHTDWELARNRHYITHTPDCRGSASYCGRFESITLSFSPETLALWVPDISAVIKNKIDSHCCCQQHRCNAETHLTA
QALRHALMRMHGGFSHEQKPSTLWLQGQSLVMLSLVLDEHREDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELA
RESGLSVLKIKRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHFSAAFQKQFGVTPSTFKRGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtA YP_070125.1 transcriptional regulator YbtA Virulence HPI Protein 4e-139 99
ybtA CAA21389.1 - Virulence HPI Protein 4e-139 99
APECO1_1057 YP_853074.1 AraC family transcriptional regulator Not tested PAI IV APEC-O1 Protein 9e-140 99
ybtA CAB46574.1 yersiniabactin transcriptional regulator, YbtA Virulence HPI Protein 1e-137 99
ybtA YP_001006814.1 transcriptional regulator YbtA Not tested HPI Protein 1e-137 99
ybtA YP_002346903.1 transcriptional regulator YbtA Virulence HPI Protein 4e-139 99
ybtA NP_669705.1 AraC family transcriptional regulator Virulence HPI Protein 4e-139 99
ybtA NP_993008.1 transcriptional regulator YbtA Virulence HPI Protein 4e-139 99