Gene Information

Name : NRG857_07480 (NRG857_07480)
Accession : YP_006119854.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1559380 - 1559892 bp
Length : 513 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGGATGGTTATCAGGTACTGGAAGGCGTCCGGGCCAGAAAACAGACCCCCGTGCTGATGCTGGCAGCACGGGGCTCGGT
CGACGAACGCGTCAAAGGGCTGCGTCTGGGAGCAGATGATTATCTCCCTAAACCCTTTTCACTCATTGAATTGGTGGCGC
GTATTCAGGCGTTGGTGCGTCGCCGCCCTTCGGATGGCGCAGACATCACTCAGCTTCATATTCAGGATCTGCATCTCGAC
TTACTGGCGCGCAGGGTATTTCGCGGTGGAACGAGACTGGAACTAACCGCGAAAGAGTTTTCCCTGTTGAGTTTGCTCGC
TCGCCATCAAGGGGAGATCCTGTCAAAGATGATGATTGCCGAACAAGTCTGGGACATGAATTTTGATAGTGATGCCAATG
TGGTTGAAGTCGCTATTAAACGTTTACGCGCCAAAGTTGATGCCCCATTCGACGTTAAGTTGCTTCATACCGTTCGCGGC
ATGGGGTATGTCCTCGAAGTCCGGCCTGAGTAA

Protein sequence : 
MDGYQVLEGVRARKQTPVLMLAARGSVDERVKGLRLGADDYLPKPFSLIELVARIQALVRRRPSDGADITQLHIQDLHLD
LLARRVFRGGTRLELTAKEFSLLSLLARHQGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRAKVDAPFDVKLLHTVRG
MGYVLEVRPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-34 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator BAC0083 Protein 4e-42 64
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator BAC0125 Protein 4e-41 59
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator BAC0638 Protein 8e-36 59
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator BAC0197 Protein 2e-39 58
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator BAC0308 Protein 7e-39 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator VFG0596 Protein 2e-34 53
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator VFG1390 Protein 3e-27 47
NRG857_07480 YP_006119854.1 two component heavy metal response transcriptional regulator VFG1389 Protein 2e-28 47