|
Name : flu (ETEC_4462) Accession : YP_006118001.1 Strain : Escherichia coli ETEC H10407 Genome accession: NC_017633 Putative virulence/resistance : Virulence Product : putative antigen 43 precursor (fluffing protein) Function : - COG functional category : - COG ID : - EC number : - Position : 4841315 - 4844284 bp Length : 2970 bp Strand : - Note : - DNA sequence : ATGAAGGGTGAGAGCGTTTACGCCCGGGACGTATCGCTGTGCCCGATAACTCTGTTTTGTACCTGCCGGTATCCACTTTT GTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGGTAT GGAATCACATTACGGGCACCCTGGTGGTGGCCTCCGAACTGGCCCGCTCACGGGGAAAACGCACCGGTGTGGCAGTTGCG CTGTCTCTTGCCACCGCCACTTCAGTCCCGGCCCTGGCTGCTGACAGTGTTGTACAGGCGGGAGAAACCGTGAGCGGCGG AACACTGGAAAATCATGACAACCAGATTGTCTTCGGTACGACCAACGGAATAACCATCAGTACCGGGCTGGAGTATGGGC CGGATAACGAGGCCAATACTGGCGGGCAATGGGTACAGGATGGCGGCACAGCCAGTAATACCACCATCAGCAGCGGTGGG CTCCAGTTTGTAGGTGCCGGGGGAAAGGCTACAGACACAATAATCAATGAAGGAGGCGGACAAAGTCTGAAGGGACTGGC ACTGAACACCACGCTGAATGGTGGCGAGCAGTGGATGCATGAAGGTGCGATAGCCACAGGAACCGTCATTAATGATAAGG GCTGGCAGGTCGTCAAACCCGGCGCAGTGGCAACAGACACCGTTGTGAATACCGGCGCGGAAGGAGGACCGGATGCAGAA AATGCTGATACCGGACAGTTTGTTCGCGGAGATGCCGTACGTACCACCATCAATAAAAATGGTCGTCAGATTGTGGTAGC CACCGGAGTGGCAAACACCACGGTGGTTTATGCCGGCGGCGACCAGACTGTGCATGGCTACGCGCTGGATACCACACTGA ACGGCGGTAACCAGTATGTGCACAACGGCGGTACAGCGTCCGACACTGTTGTGAACAGTGACGGCTGGCAGATTATCAAG GAGGGTGGTCTGGCGGATTTCACCACCGTTAACCAGAAAGGCAAACTGCAGGTGAACGCCGGTGGTACAGCCACGAATGT CACCCTGAAGCAGGGCGGCGCACTGGTCACCAGTACAGCAGCAACTGTTCTTGGCAGCAACCGTCTGGGGAATTTCACGG TGGAAAACGGTAAGGCTGACGGTGTTGTTCTGGAGTCCGGTGGTCGCCTGGATGTACTGGAGGGCCATTCAGCCTGGAAA ACACTGGTGGATGACGGCGGTATCCTGGCAGTGTCTGCCGGTGGTAAGGCAACAGATGTCACCATGACATCCGGTGGTGC CCTGATTGCAGACAGTGGTGCCACTGTTGAGGGGACCAATGCCAGCGGTAAGTTCAGTATTGATGGTATATCCGGTCAGG CCAGCGGCCTGCTGCTGGAAAATGGCGGCAGCTTTACGGTTAATGCCGGGGGACAGGCTGGCAACACCACTGTCGGACAT CGTGGAACACTGACGCTGGCTGCCGGGGGAAGTCTGAGTGGAAGAACACAGCTCAGTAAAGGCGCCAGTATGGTACTGAA TGGTGATGTGGTCAGTACCGGCGATATTGTTAACGCAGGAGAGATTCACTTTGATAATCAGACGACACAGGATGCCGTAC TGAGCCGTGCTGTTGCAAAAAGTAACTCCCCGGTAACGTTCCATAAACTGACCACCACGAACCTCACCGGCCAGGGTGGC ACCATCAATATGCGTGTCAGCCTTGATGGCAGTAATGCCTCTGACCAGCTGGTGATTAATGGTGGTCAGGCAACCGGCAA AACCTGGCTTGCGTTTACAAATGTCGGAAACAGTAACCTCGGGGTGGCAACCTCCGGACAGGGTATCCGGGTTGTGGATG CACAGAATGGCGCCACCACAGAAGAAGGTGCGTTTGCCCTGAGTCGCCCGCTTCAGGCCGGCGCCTTTAACTACACCCTG AACCGTGACAGCGATGAAGACTGGTACCTGCGCAGTGAAAATGCTTATCGTGCTGAAGTCCCCCTGTATACATCCATGCT GACACAGGCAATGGACTATGACCGGATTCTGGCAGGCTCCCGCAGCCATCAGACCGGTGTAAACGGTGAAAATAACAGCG TCCGTCTCAGCATTCAGGGCGGTCATCTCGGTCACGATAACAACGGCGGTATTGCCCGTGGAGCCACGCCGGAAAGCAGC GGCAGCTATGGCTTCGTCCGTCTGGAGGGTGACCTGCTGAGAACAGAGGTTGCCGGTATGTCTGTGACCGCGGGGGTATA TGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGCGCCGGCACGGTCCGGGATGATGCCGGCA GTCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGC ATGAAAGCGTCAACGGACAATAACGACTTCCGCGCCCGGGGTTGGGGCTGGCTGGGTTCACTGGAAACCGGTCTGCCCTT CAGTATCACTGACAACCTGATGCTGGAGCCACAACTGCAGTATACCTGGCAGGGACTTTCCCTGGATGACGGTAAGGACA ACGCCGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATG ACCTTTGGCGAAGGCACCTCATCCCGTGCCCCCCTGCGTGACAGTGCAAAACACAGTATGCGTGAACTGCCGGTGAACTG GTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCCCGGGGAGACATGAGCATGGGTACAGCCGCAGCCGGCAGTAACA TGACGTTCTCACCGTCCCGGAATGGCACGTCACTGGACCTGCAGGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACT CTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCATCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGT GACCTTCTGA Protein sequence : MKGESVYARDVSLCPITLFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAVA LSLATATSVPALAADSVVQAGETVSGGTLENHDNQIVFGTTNGITISTGLEYGPDNEANTGGQWVQDGGTASNTTISSGG LQFVGAGGKATDTIINEGGGQSLKGLALNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPGAVATDTVVNTGAEGGPDAE NADTGQFVRGDAVRTTINKNGRQIVVATGVANTTVVYAGGDQTVHGYALDTTLNGGNQYVHNGGTASDTVVNSDGWQIIK EGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAWK TLVDDGGILAVSAGGKATDVTMTSGGALIADSGATVEGTNASGKFSIDGISGQASGLLLENGGSFTVNAGGQAGNTTVGH RGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIHFDNQTTQDAVLSRAVAKSNSPVTFHKLTTTNLTGQGG TINMRVSLDGSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNYTL NRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESS GSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHS MKASTDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDM TFGEGTSSRAPLRDSAKHSMRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLDLQAGLEARVRENIT LGVQAGYAHSVIGSSAEGYNGQATLNVTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85197.1 | antigen43 protein orthologue | Not tested | PAI V 536 | Protein | 0.0 | 93 |
| unnamed | AAL08472.1 | putative autotransporter | Not tested | SRL | Protein | 0.0 | 92 |
| Z1211 | NP_286746.1 | adhesin | Not tested | TAI | Protein | 0.0 | 88 |
| Z1651 | NP_287154.1 | adhesin | Not tested | TAI | Protein | 0.0 | 88 |
| S3195 | NP_838479.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 64 |
| aec67 | AAW51750.1 | Aec67 | Not tested | AGI-3 | Protein | 0.0 | 64 |
| aidA | ADD91708.1 | AidA | Not tested | PAI-I AL862 | Protein | 0.0 | 61 |
| sap | AAK00474.1 | Sap | Not tested | SHI-1 | Protein | 0.0 | 57 |
| unnamed | CAD66200.1 | hypothetical protein | Virulence | PAI III 536 | Protein | 0.0 | 57 |
| SF2991 | NP_708765.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 57 |
| flu | CAI43838.1 | antigen 43 | Not tested | LEE | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| flu | YP_006118001.1 | putative antigen 43 precursor (fluffing protein) | VFG1063 | Protein | 0.0 | 92 |
| flu | YP_006118001.1 | putative antigen 43 precursor (fluffing protein) | VFG1675 | Protein | 0.0 | 57 |
| flu | YP_006118001.1 | putative antigen 43 precursor (fluffing protein) | VFG0655 | Protein | 0.0 | 57 |
