Gene Information

Name : klcA (ETEC_4455)
Accession : YP_006117994.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : putative antirestriction protein klca
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4833435 - 4833908 bp
Length : 474 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACATTGTCTCAGAACACCACCTCTTCGGTCTCAGCACCGGAGACTGACCTGCAACAACTGGTTGCCAGCCTCGT
CCCTGATGAACAACGTATCAGTTTCTGGCCGCAGCACTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCCGTATCT
TCGGCTGGATGGACCGTCTTTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGTGGCGCATTT
ATGGCCCCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGAAATGAG
CCCGGAAGCCGCCGGCATTGCTGCCTGTCTGATGACGTACAGCCATCATGCCTGTCGTACGGAGTGTTATGCCATGACGG
TCCATTATTACCGGCTGCGGGATTATGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATTGACTGA

Protein sequence :
MKTLSQNTTSSVSAPETDLQQLVASLVPDEQRISFWPQHFGLIPQWVTLEPRIFGWMDRLCEDYCGGIWNLYTLNNGGAF
MAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 2e-64 98
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 2e-64 98
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 3e-64 97
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 4e-64 96
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-60 90
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-60 90
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-60 90
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 3e-64 88
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 4e-65 88
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-63 88
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 7e-58 88
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 4e-59 87
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 2e-59 87
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 4e-63 87
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 2e-59 87
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-63 85
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 3e-62 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
klcA YP_006117994.1 putative antirestriction protein klca VFG0659 Protein 4e-65 98
klcA YP_006117994.1 putative antirestriction protein klca VFG1677 Protein 6e-64 88
klcA YP_006117994.1 putative antirestriction protein klca VFG1527 Protein 6e-64 85
klcA YP_006117994.1 putative antirestriction protein klca VFG1616 Protein 1e-62 85