Gene Information

Name : ETEC_4448 (ETEC_4448)
Accession : YP_006117987.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4829797 - 4830642 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGAAATCACAGCCCCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACGAAAGAGTACGCTGCTGCAAATCGACACACTTACCCGGCAACTGGCAGAAATCTCAGCAATGACAGAAA
GTATTGGCGGTAAAACCGCACTGGACTGGGCGATGAAACAGGATTTTCGCTGCGGTTGCTGGCTGATGGAAAAACCTGAA
ACGGCAATGAAAGCCATCACCCGCAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGAGACATGGTACCGGTCACTGGAATACGATAATTTTCCGGAAATCAGCGAAGCGAACATTC
TGAGCACATTTAAACAACTGCACCAGAACAAAGATGAAGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGACTGAGC
TGGAATTACAAAACTAATTGCCCCTGTAAATTTGGCAGTAAAATTATCATTAACAACCTGGTAAGGTGGGACCGGTGGGG
ATTTCATCTTATCACCGGGCAACAGGCTGACCGACTCGCCGATCTGGAAAGAATGTTGCACCTGTTCAGCGGTAAACCGA
TCCCCGACAACCGGGAAAACATAACCATTCATCTGGATGATCACATCCGGTCTGTTCAGGGTAAAGAGTGCTATGAAGAT
GAGATGTTCAGCATCAGATACTTTAAGAAAGGCTCCGCGCACATCACGTTCAGGAAACCAGAACTGGTTGACAGGCTGAA
TGATATTATTGCGAAATACTATCCGGAAACCTTATCGTCCGTTTAA

Protein sequence :
MSEITAPRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLTRQLAEISAMTESIGGKTALDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARETWYRSLEYDNFPEISEANILSTFKQLHQNKDEVFERGVINVFRGLS
WNYKTNCPCKFGSKIIINNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRENITIHLDDHIRSVQGKECYED
EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKYYPETLSSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57572.1 unknown Not tested LEE Protein 7e-123 93
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-123 93
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-123 93
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 2e-121 93
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 1e-123 92
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 3e-121 90
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 4e-121 90
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 2e-121 90
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-121 90
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-124 90
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-124 90
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 5e-121 90
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 4e-121 90
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 2e-122 90
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 2e-112 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_4448 YP_006117987.1 hypothetical protein VFG1533 Protein 8e-124 92
ETEC_4448 YP_006117987.1 hypothetical protein VFG0666 Protein 2e-121 90
ETEC_4448 YP_006117987.1 hypothetical protein VFG1685 Protein 1e-112 90