Gene Information

Name : ETEC_3949 (ETEC_3949)
Accession : YP_006117487.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4259109 - 4259600 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence :
ATGATGAAACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGT
CGATGGTGTTAATCTTGCTGAACTGATTAACGTGGCCTGCGACAATGGCTACTCCCTTCGTGTTGTTGATGAATCTGACC
GGACCGCAACTGACAGCATGCCACCCTCCGCTGCCCTGAGCGGTATACGCTGCAGCACCGCACATATCACGGAAACAGAC
AACGCCTGGTTGTACTCGCTGTCACACCAGACCAGTGACTTCGGCGAATCAGAATGGATTCATTTTACCGGTAGCGGATA
TCTGTTACGTACCGATGCGTGGTCATACCCGGTCCTGCGGCTTAAACGCCTGGGGCTGTCAAAAACGTTCCGTCGTCTGG
TTATCACACTTACCCGACGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCGGGTTTACCCACT
TTCAACTGGTAA

Protein sequence :
MMKLALTLEADSINVQALNMGRIVVDVDGVNLAELINVACDNGYSLRVVDESDRTATDSMPPSAALSGIRCSTAHITETD
NAWLYSLSHQTSDFGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVITLTRRYGVSLIHLDASAECLPGLPT
FNW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 2e-67 92
unnamed AAC31487.1 L0008 Not tested LEE Protein 1e-67 91
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 1e-67 91
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 2e-67 91
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 2e-67 91
unnamed AAL08479.1 unknown Not tested SRL Protein 2e-66 89
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 3e-67 89
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 3e-67 89
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 1e-64 89
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-63 88
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 3e-63 88
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 7e-64 88
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 4e-64 88
unnamed AAL57574.1 unknown Not tested LEE Protein 2e-56 87
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-61 87
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 4e-63 87
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-60 87
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 2e-61 86
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 6e-62 86
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 1e-61 85
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 1e-61 85
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 1e-54 84
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 1e-61 83
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 2e-52 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3949 YP_006117487.1 hypothetical protein VFG1621 Protein 7e-68 92
ETEC_3949 YP_006117487.1 hypothetical protein VFG0787 Protein 4e-68 91
ETEC_3949 YP_006117487.1 hypothetical protein VFG1070 Protein 7e-67 89
ETEC_3949 YP_006117487.1 hypothetical protein VFG1683 Protein 5e-65 89
ETEC_3949 YP_006117487.1 hypothetical protein VFG1531 Protein 3e-62 86
ETEC_3949 YP_006117487.1 hypothetical protein VFG0664 Protein 4e-62 85