Gene Information

Name : ETEC_3945 (ETEC_3945)
Accession : YP_006117483.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : putative antirestriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4256850 - 4257335 bp
Length : 486 bp
Strand : +
Note : -

DNA sequence :
ATGACAACCTCTTCGCATAATTCCACCACACCTTCTGTTTCCGTAACCACTGCATCAGGGAATAACCAGTCTCAACTGGT
TGCCACTCCCGTCCCTGATGAACAGCGCATCAGTTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGCGGGGCATTTATGGCACCCGAACCGGATGACGATAATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGTCCGGAAGCTGCCGGCATTGCTGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTT
ATGCCATGACGGTCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGTGCATCATC
GACTGA

Protein sequence :
MTTSSHNSTTPSVSVTTASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN
GGAFMAPEPDDDNDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMCII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 6e-58 98
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 3e-58 98
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 3e-58 98
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 3e-63 98
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 9e-56 98
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 5e-56 97
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 1e-56 96
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 8e-63 96
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 8e-56 95
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 8e-56 95
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 5e-62 95
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-56 94
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-56 94
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-56 94
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 3e-61 94
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 5e-62 94
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 7e-60 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3945 YP_006117483.1 putative antirestriction protein VFG1677 Protein 1e-63 98
ETEC_3945 YP_006117483.1 putative antirestriction protein VFG1527 Protein 3e-63 96
ETEC_3945 YP_006117483.1 putative antirestriction protein VFG0659 Protein 2e-56 95
ETEC_3945 YP_006117483.1 putative antirestriction protein VFG1616 Protein 2e-62 95