Gene Information

Name : ETEC_3942 (ETEC_3942)
Accession : YP_006117481.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4254826 - 4255611 bp
Length : 786 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGAACAGAAAACTAAATATATGGCTATTACGTCATTTCCTGAACAGTCACTGCATACCTTCCATCATTATCAATAA
CACCGTACGTTCATTTCAGAGGTCAGTCATGAATACCAGAACTCTTTTTCCCCTGCTTTTTACTGTTGCATCATTCTCCG
CCTCCGCCGGTAACTGGGCCGTCAAAAACGGCTGGTGTCAGACCATGACGGAAGATGGTCAGGCGCTGGTAATGCTGAAA
AATGGCACGATTGGTATTACCGGCCTGATGCAGGGATGCCCGAATGGTGTACAGACGCTCCTGGGCAGCCGTATCAGTAT
TAACGGTAACCTGATCCCCACATCACAAATGTGTAATCAGCAGACGGGATTCAGGGCTGTTGAGGTGGAAGTCGGACAGG
CGCCGGAAATGGTCAAAAAAGCCGTTCACTCCATAGCAGAGCGTGATGTGTCCGTTTTACAGGCATTTGGTGTACGAATG
GAATTCACCCGCGGTGATATGCTGAAGGTCTGTCCGAAATTTGTCACGTCACTTGCCGGTTTTTCCCCGAAACAGATACC
CGCCATTAATAAAGATTCCGTCCTGCAGGCTGCCCGGCAGGCATACGCCCGGGAATATGACGAGGAAACAACAGAAACCG
CTGATTTTGGCTCTTACGAAGTAAAAGGCAATAAGGTTGAGTTTGAAGTGTTCAATCCTGAAGACCGTGCGTACGACAAA
GTGACCGTCACGGTTGGTGCTGACGGTAATGCCACCGGTGCCAGCGTTGAATTTATCGGAAAATAG

Protein sequence : 
MLNRKLNIWLLRHFLNSHCIPSIIINNTVRSFQRSVMNTRTLFPLLFTVASFSASAGNWAVKNGWCQTMTEDGQALVMLK
NGTIGITGLMQGCPNGVQTLLGSRISINGNLIPTSQMCNQQTGFRAVEVEVGQAPEMVKKAVHSIAERDVSVLQAFGVRM
EFTRGDMLKVCPKFVTSLAGFSPKQIPAINKDSVLQAARQAYAREYDEETTETADFGSYEVKGNKVEFEVFNPEDRAYDK
VTVTVGADGNATGASVEFIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5158 NP_757006.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-117 99
unnamed CAD33783.1 hypothetical protein Not tested PAI I 536 Protein 5e-116 97
ORF_45 AAZ04454.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-116 97
unnamed CAD42095.1 hypothetical protein Not tested PAI II 536 Protein 2e-116 97
APECO1_3491 YP_854320.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-116 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3942 YP_006117481.1 hypothetical protein VFG1614 Protein 9e-117 97
ETEC_3942 YP_006117481.1 hypothetical protein VFG1524 Protein 3e-116 97