Gene Information

Name : ETEC_3941 (ETEC_3941)
Accession : YP_006117480.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : putative DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4254103 - 4254783 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGATAATCGTTCCCGGCATGATCGCCTGGCGGTTCGCTTATCACTCATTATCAGCCGACTGATGGCCGGAGAATC
TCTGTCACTAAAAACACTGTCAGATGAATTTGGTGTTACAGAACGTACCTTACAGCGCGATTTTCATCAGCGTCTGGTTC
ACCTGGACTTAGAGTACAGAAATGGCCGGTACAATCTCAGACGGCAGAGCAACCCGGGCGCGATCCCTGAAATGCTTTCA
TTTATACAGAATACGGGGATCGCACGGATACTTCCGCTCCGGAACGGACGACTGATAACCTGTCTTACCGACAACCAGGA
GCCCTCTCCCTGCCTTATCTGGCTACCGGCGCCGGATATCACTGCAACACTCCCAGAGTGTTTCTCGCAACTCATCCTGG
CAATAAGACAGTGCATCCACATCTCGCTGGTGACTGAGCGATGGTATCCGTCACTGGAACCCTGCCGGCTCATTTATTAC
AGCGGAAGCTGGTATCTGATCGCGTTACAGAAGGGAAAACTGCGGGTCTTTCCCCTGGCAGACATCAAATCGGTCAGCCT
GACATCAGAACGGTTTGAACGGAGAGACCACATCCACAGTCTGGTCGCTGAAGAGCGTTTTATCTCCGCTCTGCCACATT
TCCCTTTCATCCATAAACTTATCAACACCTTTAACCTGTGA

Protein sequence : 
MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYRNGRYNLRRQSNPGAIPEMLS
FIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDITATLPECFSQLILAIRQCIHISLVTERWYPSLEPCRLIYY
SGSWYLIALQKGKLRVFPLADIKSVSLTSERFERRDHIHSLVAEERFISALPHFPFIHKLINTFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 4e-102 97
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 2e-101 97
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-101 96
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 3e-101 96
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-101 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3941 YP_006117480.1 putative DNA-binding protein VFG1613 Protein 2e-102 97
ETEC_3941 YP_006117480.1 putative DNA-binding protein VFG1523 Protein 1e-101 97