Gene Information

Name : ETEC_3939 (ETEC_3939)
Accession : YP_006117478.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : putative ATP/GTP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4253016 - 4253900 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence :
ATGTCATTCAGCCATTCTTCCCTCTCCGCGCAAGTGAAATCACATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT
CCTTGAACATCTCCGCAGCGCTATTCATTACGAACCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGCAGCC
TGTGTAATGCTATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGTCAGGCTCATCGCCTTACC
CTTCAGTTAGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAGACACTGCAACATGATCAGGAATACCG
GGAGCTTTACCGTCAGTTACTGCCGGAACTGGATCTGATTATCTGGATCCTGCGGGCTGATGAACGTGCGTATGCCGCCG
ACATTACCATGCATCAGTTTTTACTGAATGAAGGCGCAGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCCGGCGAGTGGAACGACACAGAAAAATGCCCGTCCCGTCAGCAGGAACTCTCACTGGCAACAGTAACAGC
CCGGGTGGCAACCCTGTTCCCTTCATCACTTCCGGTACTCCCCGTTGCCGCACCTGTCGGCTGGAATCTTCCGGCACTGG
TGTCGCTGATGATCCACGCACTGCCACCACAGGCAACCAGCGCAGTTTATTCACATATCCGGGGGGAAAACCGCTCTGAA
CAGGCCCGGAAACACGCACAACAAACTTTTGGTGACGCCATCGGGAAAAGCTTTGACGCTGCCGTTGCCCGATTCAGCTT
TCCGGCCTGGATGTTACAGCTTCTGCGTAAGGCCCGGGACCGCATTATCCACTTGCTGGTCACACTGTGGGATCGTCTGT
TCTGA

Protein sequence :
MSFSHSSLSAQVKSHLTFLPEEIRQKILEHLRSAIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT
LQLGERRMTLVDLPGIGETLQHDQEYRELYRQLLPELDLIIWILRADERAYAADITMHQFLLNEGADPSRFLFVLSHADR
VFPAGEWNDTEKCPSRQQELSLATVTARVATLFPSSLPVLPVAAPVGWNLPALVSLMIHALPPQATSAVYSHIRGENRSE
QARKHAQQTFGDAIGKSFDAAVARFSFPAWMLQLLRKARDRIIHLLVTLWDRLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-131 95
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-131 95
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 8e-132 95
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-132 95
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 7e-131 94
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 1e-130 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3939 YP_006117478.1 putative ATP/GTP-binding protein VFG1612 Protein 4e-131 94
ETEC_3939 YP_006117478.1 putative ATP/GTP-binding protein VFG1522 Protein 5e-131 93