Gene Information

Name : ETEC_3936 (ETEC_3936)
Accession : YP_006117476.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4249253 - 4249984 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :
ATGAATCAACCAATACACAATGCTTACTGGTTATCCCGTTTTGAAAGTATTCTCAACAGTGCCCTGGCGCAACACCGTGC
CGTCTCGTTAATCCGGGTGGATTTACGTTTCCCTGAGTATATGCCTGCCACCATCATGGATACCGATTTAGATTCAGCGG
TGATTTCTCGTTTTTTCGAATCCCTGAAAGCAAAAATTCAGGCTTACCAGCGACATAAACGACGTGCCAACAAGCGTGTG
CGTGCAACCACCCTGCATTATTTCTGGTGTCGGGAGTTTGGCAAGGAAAAAGGCAGGAAACATTATCACGTGATATTACT
GCTCAACAAAGATACCTGGTGCTCGCCAGGGGATTTCACCGTTCCTTCTTCGCTGGCGACGCTGATCCAACTGGCATGGT
GCAGTGCTCTGCATCTCGAGCCCTGGCAGGGTAATGGACTGGTTCATTTTTCCAGGCGGACGCCTTTCCGTAAACCGACA
TCATCTGATGCTCGCCCTTCTTCCGATGATACGCCTTTGTCGGGTGGATGTTCTGAAACCAAGAAGGCTTCAGACAAAAA
GTCTGGTGGATCCGCTGTGCTCTGGGTCAAGCGTGGTGATGTGGAAGCGATGCAGAAAGCCATGGAGAGAGCCCTTTATC
TCGTGAAGTATGAGACGAAGCAGCATGACGGTTCTGGTCAACGTAATTATGGTTGCAGTCGTGGAGCGGGGCGTCTACTG
GATGGCAGGTGA

Protein sequence :
MNQPIHNAYWLSRFESILNSALAQHRAVSLIRVDLRFPEYMPATIMDTDLDSAVISRFFESLKAKIQAYQRHKRRANKRV
RATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATLIQLAWCSALHLEPWQGNGLVHFSRRTPFRKPT
SSDARPSSDDTPLSGGCSETKKASDKKSGGSAVLWVKRGDVEAMQKAMERALYLVKYETKQHDGSGQRNYGCSRGAGRLL
DGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 2e-103 96
c5172 NP_757020.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-90 84
unnamed AAL67401.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-90 84
ORF_40 AAZ04449.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-90 84
APECO1_3496 YP_854315.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-90 84
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 6e-35 41
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-35 41
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 1e-36 41
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3936 YP_006117476.1 hypothetical protein VFG1610 Protein 9e-104 96