Gene Information

Name : ETEC_3935 (ETEC_3935)
Accession : YP_006117475.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4248297 - 4248869 bp
Length : 573 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGGTATCCCTCATTTCGACTATAGCCTGGCGCCCTTCTGGCCGTCTTATCAGAACAAAATCATCGGTGTTCTCAA
CCGTGCGCTGCGTGAACAGTCCTGCTCCCGGGTACGGCGGATCCTGCTTCGTCTGCCGTGGGAACATGACAACGCCTTCA
GTGACAGAAAAATCTGGTTCGGTATGGATTTTATCGAAACCGTCAGTGCGCTGATGAATGCAACACCCGGACGTGACCTC
TGCTGGCTCCTGACCCGTCATCCTGAAAAACCGGAATACCACGTGGTGCTGTGCGTCAGACAGGAGTATTTCGACGGCCC
TGAACTGGACCGGCTGATTCTGGATGCCTGGAGCAACGTACTGGGCTTCGCGTCACCGGGTGAAGCGGCACCGTACCAGA
AACAGATAACCCGGGATGTGGTGCTGGACAGTCGTTCACCGGACTGCGAAGACATCCTCAAAGACTTGATCTGGGCGTTC
AGTGATTTCGCCCGCGATCGCCGTGGAGTGTGCGATCCGGAAGCCCGTTGCCTCGCCGGTAATCCCTGGTATCCCGTAGC
AGGCCAGCTCTGA

Protein sequence : 
MNGIPHFDYSLAPFWPSYQNKIIGVLNRALREQSCSRVRRILLRLPWEHDNAFSDRKIWFGMDFIETVSALMNATPGRDL
CWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAAPYQKQITRDVVLDSRSPDCEDILKDLIWAF
SDFARDRRGVCDPEARCLAGNPWYPVAGQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33738.1 hypothetical protein Not tested PAI I 536 Protein 6e-80 93
APECO1_3515 YP_854260.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-79 92
ORF_19 AAZ04429.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-79 92
unnamed CAD42061.1 hypothetical protein Not tested PAI II 536 Protein 2e-76 92
unnamed AAL67421.1 unknown Not tested PAI II CFT073 Protein 8e-60 89
c5193 NP_757041.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-77 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3935 YP_006117475.1 hypothetical protein VFG1479 Protein 3e-80 93
ETEC_3935 YP_006117475.1 hypothetical protein VFG1580 Protein 1e-76 92