Gene Information

Name : ETEC_3933 (ETEC_3933)
Accession : YP_006117473.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4247177 - 4247725 bp
Length : 549 bp
Strand : -
Note : -

DNA sequence : 
GTGCAAATAACCGAAGCATTACTTTCAGAGCCGGGAGACATCCGGCGTTTTGTTCAGCAGGCGGTGGACCACTGGCCGCA
TCTGCTGGCATTTTACTTCACACTCCATTCGGCAGAAGGAAATATCAACGGGCAACAGATTCACGCATTCTGTACTTCCT
TTTACCGACAGGTGCACGAACGTATTACTGAGCGTAATCACACGGCCAGTCCATCCTCGCCGATGGTATTACGCTGGTTG
CGGGAACAACATGGAGGAGCAACAATACGATGCCTGTTGCTGCTCAGCCAGACGAGCATTTGCCATCCGCGGGCCAGTGC
CACGGTTGATGAACAATGTTCGCAAGTGGTGGATTTACTGCAACAGACCTGGCGGATGATAAGTGCTGGCGGACAATGCC
GGGTGGAAAAGTGTTTTCGGGTTGCCCGGGGTGATACATCCGGCCAGTATGTTGCGTTAAAAACAGTCGCATTGTCTCTG
GGGTTACCGGTTGTGACCGCCATTATCCATCGTCCGGTACAGCGCTGTACATTGATTACAGCTCAGTGA

Protein sequence : 
MQITEALLSEPGDIRRFVQQAVDHWPHLLAFYFTLHSAEGNINGQQIHAFCTSFYRQVHERITERNHTASPSSPMVLRWL
REQHGGATIRCLLLLSQTSICHPRASATVDEQCSQVVDLLQQTWRMISAGGQCRVEKCFRVARGDTSGQYVALKTVALSL
GLPVVTAIIHRPVQRCTLITAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42059.1 hypothetical protein Not tested PAI II 536 Protein 5e-75 90
z1194 AAT48702.1 hypothetical protein Not tested PAI II 4787 Protein 9e-57 82
z1194 CAC43420.1 hypothetical protein Not tested PAI III 536 Protein 4e-54 79
ECO111_3777 YP_003236112.1 hypothetical protein Not tested LEE Protein 4e-51 76
Z1634 NP_287137.1 hypothetical protein Not tested TAI Protein 4e-59 75
Z1194 NP_286729.1 hypothetical protein Not tested TAI Protein 4e-59 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3933 YP_006117473.1 hypothetical protein VFG1578 Protein 2e-75 90
ETEC_3933 YP_006117473.1 hypothetical protein VFG1638 Protein 2e-54 79