Gene Information

Name : ETEC_0317 (ETEC_0317)
Accession : YP_006113906.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : putative prophage transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 339206 - 339409 bp
Length : 204 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTAATTACAATTCATTAATTCGTCTCTCTGAAGTTCAAAGGCGAACTGGTTATAGCAAAGCATGGATTTATCGTCT
TATTAGTCAGGGGAGGTTCCCTAAACAGGTAAAAATTGGAAGTCGGGCAATTGCTTTTGTTGAGTCTGAAATAGATGAAT
GGATTGAGAAGTGTATATTAGAATCTAGAGACGAGGTGGCCTGA

Protein sequence : 
MANYNSLIRLSEVQRRTGYSKAWIYRLISQGRFPKQVKIGSRAIAFVESEIDEWIEKCILESRDEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-07 48
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 48
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 48
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 6e-08 46
unnamed CAA21398.1 - Not tested HPI Protein 8e-08 46
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 4e-08 46
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 46
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 46
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 1e-05 44
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 3e-05 42
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 8e-05 42
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 8e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_0317 YP_006113906.1 putative prophage transcriptional regulator VFG1118 Protein 8e-08 48
ETEC_0317 YP_006113906.1 putative prophage transcriptional regulator VFG1141 Protein 2e-08 46