Gene Information

Name : ETEC_3215 (ETEC_3215)
Accession : YP_006116755.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : putative GTP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3471001 - 3472047 bp
Length : 1047 bp
Strand : +
Note : -

DNA sequence :
ATGAATAGAGCAACGTCCGCATCTGGCACAGAGCGGACTGTCAGATTAGATTCAGACCTGTATCAGCCACATATACCTGC
ATTCCAAATAATTTCATACAGATATTATCGTTGTGAATCCCCCGCCACCTTTCCGGTGCGCGGGGTTTTGTCTTTTTTCA
CCGGGAATACATGTATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCTCTCCTCCCTGCCTTACTCACTTTCC
CGTCACATCCTGGAACATCTGCGCAAACTCACCAGCCACGAACCCGTGATTGGCATTATGGGTAAAAGCGGGGCCGGTAA
ATCCTCACTCTGTAATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCAGC
GCTTCCGTCTGAGTGGCCATGGTCACAGCATGGTTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCA
GAGTATGAGGCCCTGTACCGTGACATTCTGCCTGAACTGGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCT
GTCTGTGGATGATTATTTCTGGCGACACATCCTGCACCGGGGACATCAGCGGGTACTGTTTGTGGTGACGCAGGCCGACA
AAACGGAGCCCTGCCATGAATGGGATATGGCCGGTATTCAGCCTTCTCCTGCACAGGCACAGAATATTCGCGAAAAAACG
GAGGCGGTATTCCGTCTGTTCCGGCCCGTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCT
GGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGG
AATCTGTCCGCTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATT
GCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACTCGGTGGTCTCTGTTGCCCGCGCTGTATGGAACTGGATTTT
CTTCTGA

Protein sequence :
MNRATSASGTERTVRLDSDLYQPHIPAFQIISYRYYRCESPATFPVRGVLSFFTGNTCMNPSDAIEAIEKPLSSLPYSLS
RHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLSGHGHSMVITDLPGVGESRDRDA
EYEALYRDILPELDLVLWLIKADDRALSVDDYFWRHILHRGHQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKT
EAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCI
ASVARTVLRAVRDSVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08471.1 unknown Not tested SRL Protein 9e-126 99
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 3e-125 99
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 6e-132 99
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 6e-132 99
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 6e-125 98
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-130 98
unnamed AAL99256.1 unknown Not tested LEE Protein 4e-123 98
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 1e-123 97
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-122 97
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-122 97
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 3e-123 97
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 4e-123 97
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 3e-148 96
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 1e-44 42
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 3e-44 41
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-44 41
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-44 41
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3215 YP_006116755.1 putative GTP-binding protein VFG1062 Protein 5e-126 99
ETEC_3215 YP_006116755.1 putative GTP-binding protein VFG1674 Protein 3e-125 98
ETEC_3215 YP_006116755.1 putative GTP-binding protein VFG0654 Protein 2e-123 97
ETEC_3215 YP_006116755.1 putative GTP-binding protein VFG1612 Protein 9e-45 42