Gene Information

Name : ETEC_3203 (ETEC_3203)
Accession : YP_006116746.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3457591 - 3459162 bp
Length : 1572 bp
Strand : +
Note : -

DNA sequence :
ATGGACACCTCACTTGCTCATGAGAACGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATCCGCCAGATGGC
TGAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCAACCGGCTGAAGGCGCTGGTTGCGAAAC
TGCAACGTATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGTGCAAAAACCGAACGGCAGATACAGGAAGCACAGGAGCGA
ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCCGCCCTGCGCCAGTC
TTCAGCCCGTAAACCGTTACCGGCCTCACTTCCCCGTGAAACCCGGGTTATCCGGCCGGAAGAGGAATGCTGTCCTGCCT
GTGGTGGTGAACTCAGTTCTCTGGGATGTGATGTGTCAGAGCAACTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA
ACACAACGTCCGAAACAGGCCTGTTGCCGGTGCGACCATATCGTGCAGGCACCGGTGCCTTCAAAACCCATTGCACGCAG
TTATGCCGGAGCGGGGCTTCTGGCCCATATTGTCGCTGGAAAATATGCAGACCATCTGCCGTTATACCGCCAGTCAGAGA
TATACCGTCGTCAGGGCGTGGAGCTGAGCCGTGCCACATTGGGGCGCTGGACAGGTGCTGTTGCTGAACTGCTGGAGCCG
CTGTATGACGTCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCTGATGATATCCCCGTCCCGGTCCAGGAGCC
GGGCAGCGGTAAAACCCGGACAGCCCGGCTGTGGGTCTACGTCCGTGATGACCGTAACGCCGGTTCACAGATGCCCCCGG
CGGTCTGGTTCGCGTACAGTCCGGACCGGAAAGGTATCCATCCACAAAATCACCTGGCCGGTTACAGCGGTGTGCTTCAG
GCCGATGCTTACGGTGGTTACCGGGCGTTATACGAATCCGGCAGAATAACGGAAGCCGCGTGTATGGCTCATGCCCGGAG
AAAAATCCACGATGTGCATGCAAGAGCGCCCACCTACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATGCCA
TCGAGGCAGAGGTCCGGGGCTGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAGCCAGAGCCGCGCCACTGATGCAGTCA
CTGTATGACTGGATACAGCAACAGATGAAAACACTGTCGCGTCACTCAGATACGGCAAAAGCGTTCGCATACCTGCTGAA
ACAGTGGGATGCACTGAACGTGTACTGCAGTAATGGCTGGGTGGAAATCGACAACAACATCGCAGAGAACGCCTTACGGG
GAGTGGCCGTAGGCCGGAAAAACTGGATGTTCGCGGGTTCCGACAGCGGTGGTGAACATGCGGCGGTGTTGTACTCGCTG
ATCGGCACATGCCGTCTGAACAATGTGGAGCCAGAAAAGTGGCTGCGTTACGTCATTGAACATATCCAGGATTGGCCGGC
AAACCGGGTACGCGATCTGTTGCCCTGGAAAGTTGATCTGAGCTCTCAGTAA

Protein sequence :
MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQER
ISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIE
TQRPKQACCRCDHIVQAPVPSKPIARSYAGAGLLAHIVAGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP
LYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ
ADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTYITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQS
LYDWIQQQMKTLSRHSDTAKAFAYLLKQWDALNVYCSNGWVEIDNNIAENALRGVAVGRKNWMFAGSDSGGEHAAVLYSL
IGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 0.0 99
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-115 67
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-138 64
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 5e-139 64
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 3e-127 61
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 9e-132 60
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 6e-132 60
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 5e-132 60
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 4e-132 60
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 5e-132 60
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-132 60
tnp AEA34686.1 transposase Not tested Not named Protein 4e-133 60
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-131 59
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-131 59
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 9e-132 59
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-132 59
unnamed AAL08460.1 unknown Not tested SRL Protein 4e-92 57
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 4e-111 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-120 54
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 6e-111 54
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 6e-111 54
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-72 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3203 YP_006116746.1 transposase VFG1700 Protein 1e-115 67
ETEC_3203 YP_006116746.1 transposase VFG0793 Protein 2e-132 60
ETEC_3203 YP_006116746.1 transposase VFG1051 Protein 2e-92 57
ETEC_3203 YP_006116746.1 transposase VFG1736 Protein 1e-90 54