Gene Information

Name : ETEC_3200 (ETEC_3200)
Accession : YP_006116743.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3455080 - 3455487 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence :
ATGACGATGTACGCAAAATCCTTTCTTGCACTTGATGGCAACGGGCGTCTGACGGGTGCCCGTACCGCACAGACTGCACC
TTACGATCGCTACACTTGCCACCTTTGCGGCAGTGCACTCAGATACCACCCGCAATACGACACTGAACGTCCCTGGTTTG
AACACACTGACGACGGGCTGACTAAGCACGGTCATGAGTGCCCTTATGTCAGACCGGAACGCAGGGAGGTACGCTTGATT
AAGCGTCTGCAGCAATTCGTACCGGATGCCTTACCCGTGGTGCGTAAAGCCAGCTGGCACTGCAGACAATGTCACCACGA
TTATTATGGGGAGCAGTACTGCACAAACTGCCAGACCGGAGGATTCAGTATTCCCCGGACAACTCAGGAGGAAATATGCG
AATTCTGA

Protein sequence :
MTMYAKSFLALDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQYDTERPWFEHTDDGLTKHGHECPYVRPERREVRLI
KRLQQFVPDALPVVRKASWHCRQCHHDYYGEQYCTNCQTGGFSIPRTTQEEICEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-60 100
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 3e-60 97
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 1e-54 97
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 1e-52 94
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 1e-52 94
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 1e-52 94
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-57 91
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 3e-50 90
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 5e-48 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3200 YP_006116743.1 hypothetical protein VFG0645 Protein 4e-53 94