Gene Information

Name : ETEC_3166 (ETEC_3166)
Accession : YP_006116710.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate transport system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3422641 - 3423408 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGACTTTACGAACTGAAAATCTGACGGTCAGTTACGGGACAGACAAGGTACTTAACGACGTTTCACTCTCACTGCCAAC
GGGGAAGATCACCGCCCTGATCGGTCCTAACGGTTGCGGGAAATCGACGCTGTTAAACTGTTTTTCGCGGCTTTTAATGC
CGCAGTCTGGCACCGTATTTCTCGGCGATAATCCCATAAATATGCTCTCATCGCGCCAGTTGGCCCGCAGGCTTTCGCTG
CTGCCTCAGCACCATTTAACGCCAGAGGGGATCACAGTCCAGGAGCTGGTTTCGTATGGTCGTAATCCCTGGCTGTCACT
CTGGGGGCATCTCTCCGCTGAAGACAATGCACGAGTTAATGTCGCCATGAACCAGACCCGGATTAATCATCTTGCCGTTC
GTCGGTTAACCGAGCTTTCCGGCGGTCAGCGCCAGCGCGCATTTCTGGCGATGGTCCTGGCCCAGAATACGCCCGTTGTA
TTACTTGATGAACCAACCACCTATCTTGATATCAATCACCAGGTGGACCTGATGCGGTTGATGGGCGAACTCCGGACTCA
GGGGAAAACGGTGGTCGCTGTGCTGCACGACCTTAATCAGGCTAGCCGGTACTGCGATCAACTGGTGGTAATGGCAAACG
GGCATGTTATGGCGCAAGGCACACCAGAAGAGGTGATGACCCCAGGATTGCTGAGAACAGTATTCAGCGTGGAAGCGGAA
ATACACCCCGAGCCGGTATCTGGCAGGCCGATGTGCCTAATGAGGTAG

Protein sequence : 
MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSL
LPQHHLTPEGITVQELVSYGRNPWLSLWGHLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVV
LLDEPTTYLDINHQVDLMRLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPEEVMTPGLLRTVFSVEAE
IHPEPVSGRPMCLMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-111 99
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-52 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 52
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-47 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-44 43
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-29 42
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-29 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 5e-29 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-44 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-44 41
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 8e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3166 YP_006116710.1 iron(III) dicitrate transport system, ATP-binding protein BAC0164 Protein 3e-111 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3166 YP_006116710.1 iron(III) dicitrate transport system, ATP-binding protein VFG1042 Protein 2e-111 99
ETEC_3166 YP_006116710.1 iron(III) dicitrate transport system, ATP-binding protein VFG0925 Protein 1e-47 50