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Name : ETEC_3053 (ETEC_3053) Accession : YP_006116600.1 Strain : Escherichia coli ETEC H10407 Genome accession: NC_017633 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : - COG ID : - EC number : - Position : 3297243 - 3298010 bp Length : 768 bp Strand : - Note : - DNA sequence : ATGGGTGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCTGTTTTTGCCGATTGGCACCCACTTT CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTCCGTCATCCAATAATAATAGTGGTATCATGTGCAT TAGTTCAGCATTACCACTATGAATTATTGAACTTAAATGAAATCGATATTGCTTTGTTCGCTGCCAGAGAAATTATCATA GGGCTGTTTATTGCATGCTTATTAGCATCCCCGTTTTGGATTTTCCTTGCTATAGGTAGCTTTATCGATAACCAACGCGG TGCAACATTAAGTAGTACTTTGGATCCGGCTACAGGTGTCGATACCTCGGAATTAGCAAGATTATTTAACCTTTTCTCTG CTGCGGTTTATCTTACTAAAGGTGGAATGAACTTTATTCTGGAAACTCTTTGGCAAAGTTATAATTTATGGCCTTCAGGC AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAACATAATGACTCATACTATCGTTTACGCAAGCCC CGTGATTGCCGTTATGCTGGGCGGTGAGGCTGTCCTGGGATTGCTGGCACGTTATGCTTCACAACTAAATGCTTTTGCCA TTTCACTGACTGTCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGGCCCAATACTGGCTGAACGAGTAATG CCGTTATCCTTTTTCCCAGAACAATTGCAACTATACATTGAGAAATAG Protein sequence : MGEAILYQLHSLLAATALCFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALVQHYHYELLNLNEIDIALFAAREIII GLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTKGGMNFILETLWQSYNLWPSG NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFGPILAERVM PLSFFPEQLQLYIEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epaR | AAZ31291.1 | EpaR | Virulence | ETT2 | Protein | 2e-80 | 96 |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 6e-39 | 46 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 6e-39 | 46 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 3e-39 | 46 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 7e-38 | 45 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 4e-30 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ETEC_3053 | YP_006116600.1 | type III secretion system protein | VFG0549 | Protein | 1e-39 | 46 |
| ETEC_3053 | YP_006116600.1 | type III secretion system protein | VFG1014 | Protein | 1e-35 | 43 |
