Gene Information

Name : ETEC_2147 (ETEC_2147)
Accession : YP_006115709.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2310114 - 2310890 bp
Length : 777 bp
Strand : +
Note : -

DNA sequence :
ATGGAACTGCAACATCAACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCGCT
GTCACAACAGGCAGTAGACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGGCACGTC
ATCAACGTAAACAGGCGATGTATACCCGAATGGCAGCCTTCCCGGCGGTGAAAACGTTCGAAGAGTATGACTTCACATTC
GCCACCGGAGCACCGCAGAAGCAACTCCAGTCGTTACGCTCACTCAGCTTCATAGAACGTAATGAAAATATCGTATTACT
GGGGCCATCAGGTGTGGGGAAAACCCATCTGGCAATAGCGATGGGCTATGAAGCAGTCCGTGCAGGTATCAAGGTTCGCT
TCACAACAGCAGCAGATCTGTTACTTCAGTTATCTACGGCACAACGTCAGGGCCGTTATAAAACGACGCTTCAGCGTGGA
GTAATGGCCCCCCGCCTGCTCATCATTGATGAAATAGGCTATCTGCCGTTCAGTCAGGAAGAAGCAAAACTGTTCTTCCA
GGTCATCGCTAAACGTTACGAAAAGAGCGCAATGATCCTGACATCCAATCTGCCGTTCGGGCAGTGGGATCAAACGTTCG
CCGGTGATGCAGCACTGACCTCAGCGATGCTGGACCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGAGAAAGC
TATCGACTCAGACAGAAACGAAAGGCCGGGGTTATAGCTGAAGCTAATCCTGAGTAA

Protein sequence :
MELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTF
ATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRG
VMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGES
YRLRQKRKAGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-120 100
unnamed CAA21402.1 - Not tested HPI Protein 1e-119 100
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-120 100
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-120 100
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-120 100
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-120 100
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-120 100
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-119 100
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 8e-120 100
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 8e-120 100
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 5e-86 100
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 5e-119 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-119 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_2147 YP_006115709.1 transposase VFG1627 Protein 4e-120 100
ETEC_2147 YP_006115709.1 transposase VFG1606 Protein 4e-120 100
ETEC_2147 YP_006115709.1 transposase VFG1515 Protein 4e-120 100
ETEC_2147 YP_006115709.1 transposase VFG1460 Protein 3e-86 100
ETEC_2147 YP_006115709.1 transposase VFG1663 Protein 3e-119 99