Gene Information

Name : ETEC_2146 (ETEC_2146)
Accession : YP_006115708.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2309110 - 2310114 bp
Length : 1005 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCGGTTACCGCTTACCAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACCGT
TAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACACCGCGACCTGCTGTTGCTTCACTCCTGGATGAATACC
GGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTAATCGCTCGAGAGATCAGAGAC
CAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCCTCAGGAGCAGGAGCCTGCCGT
TCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATGGTCGCTCACCGCTTCACGTGT
TCGTTGCTGTTCTCGGATACAGCCGAATGTTGTACATCGAATTCACTGACAATATGCGTTATGACACGCTGGAGACCTGC
CATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATATGAAAACTGTGGTTCTGCAACG
TGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGGAGATGGGCTTCTCTCCCCGAC
TGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACCCGTAACAGTTTTTATATCCCA
CTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCACGGTCTGCGCTGGCTGCACAA
TGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCGAAGAGCAGCAGTCCATGCTGG
CACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCCTGGTGAAAATCTGGTGAACTTCGATAAACACCCCCTGCATCAT
CCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGCTGA

Protein sequence :
MSRLPLTKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRD
QGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETC
HRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIP
LMTRLRPMGITVDVETANRHGLRWLHNVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVNFDKHPLHH
PLSIYDSFCRGVAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 1e-156 99
api83 CAF28557.1 transposase Not tested YAPI Protein 1e-156 99
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 5e-157 99
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 1e-157 99
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 1e-157 99
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 2e-156 99
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 1e-157 99
y2411 NP_669718.1 transposase Not tested HPI Protein 2e-156 99
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-157 99
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 2e-156 99
unnamed CAA21403.1 - Not tested HPI Protein 2e-156 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_2146 YP_006115708.1 transposase VFG1514 Protein 6e-158 99
ETEC_2146 YP_006115708.1 transposase VFG1626 Protein 6e-158 99
ETEC_2146 YP_006115708.1 transposase VFG1607 Protein 6e-158 99
ETEC_2146 YP_006115708.1 transposase VFG1461 Protein 3e-157 99