Gene Information

Name : UM146_21800 (UM146_21800)
Accession : YP_006113200.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Unknown
Product : transposase OrfA, ISEc8
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4556097 - 4556459 bp
Length : 363 bp
Strand : -
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
ATGGTTAAACTGGCTTCACAACCAGGAGCCTCTGTTGCCCGTATTGCCAGGGAACACGATATCAATGATAACCTCCTGTT
CAAATGGCTCAGGCTCTGGCAGAACGAAGGGCGTATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGGCGCTGGCGTTG
AATTATTACCTGTTGAGATAACGCCTGATGAGCAGAAAGAGCCTGTGGCGGCTCTTACTCCGCTTTTATCCACTCCTTCA
CAAAGCACAGTCAGTGCCAGTTCCTGTAAAGTTGAGTTCCGCCACGGTAACATGACGCTGGAAAATCCGTCACCAGAGCT
GCTCACGGTGTTGATCCGTGAACTGACCGGGAGAGGACGATGA

Protein sequence :
MVKLASQPGASVARIAREHDINDNLLFKWLRLWQNEGRISRRLPVTTSSGAGVELLPVEITPDEQKEPVAALTPLLSTPS
QSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 2e-44 98
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 2e-44 98
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 4e-42 90
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 4e-42 90
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 7e-42 90
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 1e-39 83
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 5e-37 79
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 2e-23 56
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 2e-13 41
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_21800 YP_006113200.1 transposase OrfA, ISEc8 VFG1666 Protein 3e-42 90
UM146_21800 YP_006113200.1 transposase OrfA, ISEc8 VFG1672 Protein 2e-37 79
UM146_21800 YP_006113200.1 transposase OrfA, ISEc8 VFG1738 Protein 4e-24 56
UM146_21800 YP_006113200.1 transposase OrfA, ISEc8 VFG1697 Protein 6e-14 41