Gene Information

Name : UM146_21790 (UM146_21790)
Accession : YP_006113198.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4554151 - 4555719 bp
Length : 1569 bp
Strand : -
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
ATGAGTCGGAAATACCTCATTCGTATCACTGAGCTGGAAAGGCTACTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA
TCAGCAACTGAGTCTGGTTGAAGAGACGGAGGCCTTCCTGCGCTCTGCACTGGCACGTGCCGAAGAAAAGATCGAAGAGG
AGGAGCGGGAAACAGAACATCTGAGGGCCCAGATAGAAAAACTGCGCCGGATGCTGTTCGGTACCCGTTCTGAAAAACTG
CGTCGTGAAGTTGAACAGGCTGAGGCCCTGCTGAATCAACGCCGACAGGACAGCGATCGTTACAGTGGGTGGGAAGACGA
TCCACAGGTTCCCCGCCAGTTGCGACAGTCGCGCCATCGTCGTCCGTTACCGGCACACCTTCCCCGTGAAATACACCGTC
TGGAGTCTGAAGAAAGCTGTTGCCCGGAGTGTGGCAGTGAGCTGGATTATCTGGGTGAAGTCAGTGCTGAGCAGCTGGAA
CTGGTGAGTAGCGCCCTGAAAGTGATCCGCACTGTTCGGGTAAAAAAAGCCTGTACAAAATGTGACTGTATAGTTGAAGC
GCCAGCGCCGTCCCGCCCGATAGAGCGCGGCATCGCGGGCTCCGGATTACTTGCCCGCGTGTTAACGGGAAAATACTGCG
AACACCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGACAGGGTGCCGAACTGAGCCGTGCATTACTCTCCAACTGG
GTTGACGCGTGCTGCCAGTTAATGACTCCGCTGAATGATGCCCTGTACCGTTACGTGATGAACACCCGCAAGGTTCACAC
TGACGACATACCAGTAAAAGTGCTGGCACCGGGCAGAAAAAAGGCAAAAACAGGACGCATCTGGACGTATGTCCGGGATG
ACCGGAATGCGGGCTCATCAGAGCCACCGGCGGTCTGGTTCGCCTACTCACCAGACAGGCAGGGAAAACATCCGGTACAA
CACCTTCGTCCCTTCCGGGGTATCCTGCAGGCGGATGCATTCAGCGGTTACGATCGGCTGTTCAGTGCCGAACGTGAAGG
TGGTGCACTGACAGAAGTTGCGTGCTGGGCCCATGCCCGGCGAAAAATCCACGATGTATACATCAGCAGCAAAAGTACGA
CGGCAGAAGAAGCTCTGAAGCGCATCAGTGAACTGTACGCCATTGAGGATGAAATACGGGGCTTACCGGAGTCTGAACGT
CTTGCAGCCAGGCAGCAGCGAAGCAAAGCGTTACTGACGTCGCTGCATGAATGGATGGTGGAGAAGAATGGCACGTTGTC
GAAAAAATCCAGACTGGGCGAAGCGTTCAGCTATGTCCTGAATCAGTGGGACGCCCTCTGTTATTACAGTGATGACGGTC
TGGCGGAGGCGGACAATAACACAGCAGAAAGAGCGCTTCGTGCCGTCTGTCTCGGGAAAAAGAATTCTTATGACCTTTGT
CAAATATTAAGTCCAAAAAGACCTTACGCAGCTCCGGGAGCTTCGTTATATCGCGGATTAAAGAACCTGAAACAGTCAGA
CTGTATCTTGGATTTTACAAACTCTTATTCGGGGATTTTAGCCCCATGA

Protein sequence :
MSRKYLIRITELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEEERETEHLRAQIEKLRRMLFGTRSEKL
RREVEQAEALLNQRRQDSDRYSGWEDDPQVPRQLRQSRHRRPLPAHLPREIHRLESEESCCPECGSELDYLGEVSAEQLE
LVSSALKVIRTVRVKKACTKCDCIVEAPAPSRPIERGIAGSGLLARVLTGKYCEHLPLYRQSEIFARQGAELSRALLSNW
VDACCQLMTPLNDALYRYVMNTRKVHTDDIPVKVLAPGRKKAKTGRIWTYVRDDRNAGSSEPPAVWFAYSPDRQGKHPVQ
HLRPFRGILQADAFSGYDRLFSAEREGGALTEVACWAHARRKIHDVYISSKSTTAEEALKRISELYAIEDEIRGLPESER
LAARQQRSKALLTSLHEWMVEKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNTAERALRAVCLGKKNSYDLC
QILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 97
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 97
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 3e-163 95
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 8e-147 87
tnp AEA34686.1 transposase Not tested Not named Protein 2e-115 63
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-115 63
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-115 63
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 8e-116 63
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-115 63
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-115 63
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-111 62
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-115 62
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 7e-115 62
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 7e-115 62
unnamed AAL08460.1 unknown Not tested SRL Protein 7e-100 62
unnamed AAL57570.1 unknown Not tested LEE Protein 6e-116 59
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-115 59
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-86 55
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-90 52
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-90 52
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-81 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_21790 YP_006113198.1 hypothetical protein VFG1736 Protein 3e-175 89
UM146_21790 YP_006113198.1 hypothetical protein VFG0793 Protein 6e-116 63
UM146_21790 YP_006113198.1 hypothetical protein VFG1051 Protein 4e-100 62