Gene Information

Name : UM146_21690 (UM146_21690)
Accession : YP_006113178.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : pap operon regulatory protein PapB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4538505 - 4538819 bp
Length : 315 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCATCATGAAGTCATCAGTCGGTCAGGAAATGCGTTTTTGCTGAATATACGCGAGAGCGTACTGTTGCCCGGCTC
TATGTCTGAAATGCATTTTTTTTTACTGATAGGTATTTCTTCTATTCACAGTGACAGGGTCATTCTGGCTATGAAGGACT
ATCTGGTAGGTGGGCACTCCCGTAAGGAGGTCTGCGAGAAATACCAGATGAATAATGGGTATTTCAGTACAACACTGGGG
AGACTTATACGGCTGAATGCTCTTGCAGCAAGGCTTGCACCTTATTATACAGATGAGTCGTCGGCATTTGACTAA

Protein sequence :
MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQMNNGYFSTTLG
RLIRLNALAARLAPYYTDESSAFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papB YP_002414018.1 pap operon regulatory protein PapB Not tested Not named Protein 3e-37 100
papB AAC61719.1 PapB Virulence PAI I CFT073 Protein 2e-37 100
papB AAL67418.1 PapB Virulence PAI II CFT073 Protein 2e-37 100
papB AAZ04473.1 P pilus protein Virulence PAI I APEC-O1 Protein 2e-37 100
APECO1_3518 YP_854257.1 PapB-like protein Virulence PAI I APEC-O1 Protein 3e-37 100
prfB CAD42032.1 PrfB protein Virulence PAI II 536 Protein 2e-36 97
sfaB CAC43422.1 SfaB protein Virulence PAI III 536 Protein 2e-31 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_21690 YP_006113178.1 pap operon regulatory protein PapB VFG1551 Protein 8e-37 97
UM146_21690 YP_006113178.1 pap operon regulatory protein PapB VFG1641 Protein 6e-32 81
UM146_21690 YP_006113178.1 pap operon regulatory protein PapB VFG0436 Protein 1e-17 55