Gene Information

Name : UM146_21625 (UM146_21625)
Accession : YP_006113165.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : OmpA family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4526669 - 4527424 bp
Length : 756 bp
Strand : -
Note : COG3637 Opacity protein and related surface antigens

DNA sequence : 
ATGGAGATAATTGAAATGAATAAGGTTTTTGTTGTTTCAGTGGTGGCCGCAGCCTGTGTATTTGCAGTAAATGCAGGAGC
AAAGGAAGGTAAAAGCGGTTTTTATCTGACCGGTAAAGCCGGTGCCTCTGTGATGTCACTTTCAGACCAGCGTTTCCTGT
CAGGAGATGAGGAAGAAACATCAAAGTATAAAGGCGGCGATGACCATGATACGGTATTCAGTGGCGGTATTGCGGTCGGT
TATGATTTTTATCCGCAGTTCAGTATTCCGGTTCGTACAGAACTGGAGTTTTACGCTCGTGGAAAAGCTGATTCGAAGTA
TAACGTAGATAAAGACAGCTGGTCAGGTGGTTACTGGCGTGATGACCTGAAGAATGAGGTGTCAGTCAACACACTAATGC
TGAATGCGTACTATGACTTCCGGAATGACAGCGCATTCACACCATGGGTATCCGCAGGGATTGGCTACGCCAGAATTCAC
CAGAAAACAACCGGTATCAGTACCTGGGATTATGAGTACGGAAGCAGTGGTCGCGAATCGTTGTCACGTTCAGGCTCTGC
TGACAACTTCGCATGGAGCCTTGGCGCGGGTGTCCGCTATGACGTAACCCCGGATATCGCTCTGGACCTCAGCTATCGCT
ATCTTGATGCAGGTGACAGCAGTGTGAGTTACAAGGACGAGTGGGGCGATAAATATAAGTCAGAAGTTGATGTTAAAAGT
CATGACATCATGCTTGGTATGACTTATAACTTCTGA

Protein sequence : 
MEIIEMNKVFVVSVVAAACVFAVNAGAKEGKSGFYLTGKAGASVMSLSDQRFLSGDEEETSKYKGGDDHDTVFSGGIAVG
YDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWVSAGIGYARIH
QKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKS
HDIMLGMTYNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hek CAD42020.1 adhesin/virulence factor Hek Virulence PAI II 536 Protein 4e-89 99
tia AFX83958.1 tia invasion determinant Not tested SE-PAI Protein 9e-63 66
tia YP_854245.1 tia invasion determinant Virulence PAI I APEC-O1 Protein 1e-59 63
tia AAZ04415.1 Tia invasion determinant Virulence PAI I APEC-O1 Protein 9e-60 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_21625 YP_006113165.1 OmpA family protein VFG1539 Protein 2e-89 99