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Name : UM146_21615 (UM146_21615) Accession : YP_006113163.1 Strain : Escherichia coli UM146 Genome accession: NC_017632 Putative virulence/resistance : Virulence Product : superfamily I DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 4521365 - 4524880 bp Length : 3516 bp Strand : + Note : COG1112 Superfamily I DNA and RNA helicases and helicase subunits DNA sequence : ATGGATGAAAATGCTTTAGGGTTTACCTCATACTGGCGCAACTCGCTTGCGGATGCTGAGTCAGGAAAGGGCAGTTTTGA ACGGAAAGACGCCAAAAATTTCACTCACTGGCATGGGATAGCGGCGGGACGTCTTGACGAAGCGATTGTCAGTAAATTTT TTAAGGGAGAAAAAGACGATGTCGAAACGGTCGATGTCATCTTGCGCCCAAAAGTTTATTTCCGGTTATTGCAGCATGGT AAGGACCGTTCTGCAGGTGCGCCTGATATTGTTACCCCGATAGTGACGCCAGCCTTGCTAAGCCGTGAGGGTTTTTTATA TCCGACGCCAGCGACCTCCATTCCCAGAGACCTGCTTGAACCTTTGCCAAAAGGAGCATTTTCGATTGGTGAGATTGGGC AGTATGACAAATACAAGACGACCCATACCACGTTCTCTATCAACTTTGATGACAGCGTTGATAAGACTGCCGAAACGGAT GAAGAACGGGAAGCACGATATGCCGCCTTGCAGCAGGAGTGGCGTCAATATCTGTATGACTCAGAGAGGCTACTGAAGAG CGTTGCCGGCGACTGGATTGAAAAACCTGAGCAATATGAACTCGCTGAGCACGGTTATATTGTTAAAACGGCTCAATCTG GCGGTGCCAGTTTCCATATCCTTTCTCTTTATGATCACCTGCTTGTTTGCAATAAGGATGTGCCGCTCTTCAATCGCTTC GCCTCGCGAGAGGTTCATGCTGCAGAGTCTTTGCTGGCCCCTGGAGCAAAATTCAGCGACAGGCTTGGACACTCCGGAGA TAAGTTTCCGCTGGCAAAGGCTCAGCGCGATGCCTTAAGCCATTTTCTGGATGCTAGACATGGCGATATCCTTGCTGTTA ATGGCCCTCCGGGAACCGGAAAAACCACGCTGGTGCTTTCTATCATCGCCACGCAGTGGGCCAGAGCGGCTCTCGAAAAA TCTGAGCCTCCGGTTATTATCGCGACTTCAACGAATAACCAGGCTGTAACGAACATTATTGAGGCATTCGGGAAAGACTT TTCGCAAGGTTCAGGTGCGATGGCCGGGCGATGGTTGCCAGAGCTGAAAAGCTTCGGCGCTTATTTTCCCTCAAGCAGCC GTAAAGCTGAAGCAGCCAAAAAATATCAAACTGAAGATTTCTTCAACCAGGTTGAGTCAAAAGAGTATGTAGAAGATGCA CTGCTGTTTTATCTCGAGAAAGCTAAGGCAGCTTTTCCTGAAAAAGAGTGTTCATCCCCTGAAAAGGTCATTGAACTCCT GCATGGTCAGTTGGCAGCAAAATCCGAGCAACTGATAAGACTGAACGCAACATGGCAAACGTTAAGCCAGGTATGGGCTG CGCGTGAGCTTATTGCTAACGACATTGAGCAATATCTCGATAATTTAAATAAATTACTTTCCGGACAAGAACAAAAAATC ACTCTACTGAAAAGTGCTAAAACGGAATGGAAAAAATATCGCGCCGGTGAATCACTGATCTATTCATTATTTTCCTGGCT CCCGGCGGTTCGCAGTAAGCGACAGTACCAAATACAACTGTTTCTCGAAGATAAATTAGGGGCGCTGATTGCAGGAAATC AGTGGTCTGATCCTGAAACTATCGAACGTAATATTGATGGGCTGCTCAATTCCGCTGAGCGCGAGCAAACAACATACCGG CAGCAGATTGACTCCGCCCATGAAATCATTCTTAAAGAACAGCAGGCGGTTCAGGAGTGGCAGAGACTGGCTCTTGATTT AGGGTATGAGGGCGACGAGGAACTGAGCTTCTCACAGGCCGATGAACTGGCTGATACGCAGATTCGCTTCCCTGCATTTT TACTGACGACTCACTACTGGGAAGGTCGTTGGCTGATGGATATGGCCAGCATTGATGATCTGCAGGAAGAGAAGAAGAAA AAAGGCGCTAAAGGGGTAACCGCCCGTTGGCAACGTCGAATGAAACTCACTCCATGTGTGGTGATGACATGCTATATGCT GCCCGGCAATATGCAGATAAGTGAGCACAAAGGACAGCGTAAATTCGAGAAAAGTTATTTGTATGATTTTGCCGATTTAC TCATTGTCGATGAAGCCGGGCAGGTGCTTCCTGAAGTGGCTGCTGCCTCGTTTGCATTAGCTAAGAAGGCATTAGTGATT GGCGATACGGAGCAGCTCCCGCCAATATGGAGTATTGCTCCTGCGATTGATGTCGGTAACATGCTGGCGGAAAAAATTCT GTCTGGCAGTACGCAAGAAGAGATTACCGAGAAATATACGGCAATCGCAGACCTTGGTAAAAGTGCCGCATCTGGCAGCG TTATGAAAATAGCGCAGTTTGCTTCACGCTATCAATATGATCCCGAACTGGCTCGTGGTATGTACCTATATGAACACCGC CGGTGCTACGACAATATTATTGGATACTGTAATACGCTCTGCTATCACGGTAAGTTGTTGCCTAAAAGAGGGCGTGAAGA GAGCAATTTAATGCCCGAAATGGGGTATCTCCATATTGATGGTAAAGGTGAGCTGGCAAGTAGTGGAAGTCGATATAATT TGCTTGAGGCTGAAACGATAGCGGTCTGGTTGGCAGAGAACCAGCAAAATATTGAAGCGCATTACGGTAAATCGCTTCAT GAAGTTGTCGGTATCGTGACGCCTTTTAGCGCTCAGGTATCCACTATCAAACAGGTGCTGGGCAAACAAGGTATCAGTAC AGGCGCGAATGAAAAATCGCTCACAGTGGGCACCGTGCACTCTCTTCAGGGAGCGGAAAGAGCGATTGTGATATTCTCGC CAGTCTATTCAAAACATGAAGACGGCGGGTTTATTGATAGCGATAACAGCATGCTGAATGTTGCAGTCTCCCGTGCGAAG GACAGTTTTCTGGTCTTCGGCGATATGGACCTGTTTGAGGTCCAGCCAGCCTCATCTCCACGGGGATTACTGGCAAAATA CCTCTTTGAGTCAGAGAAGAATGCGCTCTCTTTTGATTATAAAGAGCGTAAGGATTTAAAAACCGCCGGGACCAAAATCT ACACACTTCATGGTGTGGAGCAACATGATAATTTCCTGAATCAGACATTTGAAAATACCAGTAAACACATCATGATAGTT TCTCCATGGCTGACCTGGCAAAGGCTGGAGCAAACCGGTTTTCTTGATTCCATGATTGCGGCGTGTTCACGTGGAGTTAA CGTCACGATAGTCACTGACAGAAGCTACAACACTGAACATAATGATTTTGAGAAGCGAAAAGAGAAGCAGCAAAACTTTA AAGCGGCGCTGGAGAAACTGAATGCGCTGGGTATTGCTACAAAGCTGGTAAACCGTGTTCATAGCAAAATTGTTATTGGT GATGATGGTTTGCTGTGCGTGGGATCGTTCAACTGGTTTAGTGCGACACGGGAAGCGCGATATGAACGATACGATACCTC AATGGTTTATTGCGGTGATAACCTGAAGGGTGAGGTTGAGGCTATTTATAATAGTCTTGAGAGGCGTCAGGTTTAG Protein sequence : MDENALGFTSYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFKGEKDDVETVDVILRPKVYFRLLQHG KDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETD EEREARYAALQQEWRQYLYDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCNKDVPLFNRF ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTGKTTLVLSIIATQWARAALEK SEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDA LLFYLEKAKAAFPEKECSSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQVWAARELIANDIEQYLDNLNKLLSGQEQKI TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPETIERNIDGLLNSAEREQTTYR QQIDSAHEIILKEQQAVQEWQRLALDLGYEGDEELSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQEEKKK KGAKGVTARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI GDTEQLPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQFASRYQYDPELARGMYLYEHR RCYDNIIGYCNTLCYHGKLLPKRGREESNLMPEMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLH EVVGIVTPFSAQVSTIKQVLGKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVEQHDNFLNQTFENTSKHIMIV SPWLTWQRLEQTGFLDSMIAACSRGVNVTIVTDRSYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIG DDGLLCVGSFNWFSATREARYERYDTSMVYCGDNLKGEVEAIYNSLERRQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S3169 | NP_838460.1 | superfamily I DNA helicase | Not tested | SHI-1 | Protein | 0.0 | 99 |
| SF2965 | NP_708739.1 | superfamily I DNA helicase | Not tested | SHI-1 | Protein | 0.0 | 99 |
| unnamed | CAD42018.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 0.0 | 99 |
| APECO1_3532 | YP_854230.1 | superfamily I DNA helicase | Not tested | PAI I APEC-O1 | Protein | 0.0 | 97 |
| ORF_2 | AAZ04413.1 | superfamily I DNA helicase | Not tested | PAI I APEC-O1 | Protein | 0.0 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| UM146_21615 | YP_006113163.1 | superfamily I DNA helicase | VFG1537 | Protein | 0.0 | 99 |
| UM146_21615 | YP_006113163.1 | superfamily I DNA helicase | VFG0627 | Protein | 0.0 | 99 |
